LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE032246

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE032246

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE032246AT1G51850.1Leucine-rich repeat protein kinase family protein1positive
GWHGAAZE033418AT4G29990.1Leucine-rich repeat transmembrane protein kinase protein0.96positive
GWHGAAZE011550AT5G11880.1Pyridoxal-dependent decarboxylase family protein0.96positive
GWHGAAZE010645AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.95positive
GWHGAAZE001955AT3G17900.1unknown protein;(source:TAIR10)0.95positive
GWHGAAZE021378----0.95positive
GWHGAAZE032698AT4G29990.1Leucine-rich repeat transmembrane protein kinase protein0.94positive
GWHGAAZE032554AT5G23880.1cleavage and polyadenylation specificity factor 1000.93positive
GWHGAAZE008037AT5G60900.1receptor-like protein kinase 10.93positive
GWHGAAZE023236AT2G23590.1methyl esterase 80.92positive
GWHGAAZE032708AT4G29990.1Leucine-rich repeat transmembrane protein kinase protein0.92positive
GWHGAAZE028973AT1G64940.1cytochrome P450, family 87, subfamily A, polypeptide 60.92positive
GWHGAAZE031977AT1G03220.1Eukaryotic aspartyl protease family protein0.91positive
GWHGAAZE003798AT4G35980.1hypothetical protein;(source:Araport11)0.91positive
GWHGAAZE004664AT1G28240.1Protein of unknown function (DUF616)0.91positive
GWHGAAZE023735AT2G06845.1Beta-galactosidase related protein0.91positive
GWHGAAZE001727AT2G27700.2eukaryotic translation initiation factor 2 family protein / eIF-2 family protein0.91positive
GWHGAAZE028546AT1G62680.1Pentatricopeptide repeat (PPR) superfamily protein0.91positive
GWHGAAZE033810AT1G70130.1Concanavalin A-like lectin protein kinase family protein0.91positive
GWHGAAZE029107----0.91positive
GWHGAAZE028181AT1G09890.1Rhamnogalacturonate lyase family protein0.91positive
GWHGAAZE032810----0.91positive
GWHGAAZE029788AT5G06600.3ubiquitin-specific protease 120.91positive
GWHGAAZE019848AT3G46490.12-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein0.91positive
GWHGAAZE007986AT1G76750.1Protein of unknown function (DUF1278)0.91positive
GWHGAAZE028166AT3G42860.1zinc knuckle (CCHC-type) family protein0.91positive
GWHGAAZE001287AT3G03580.1Tetratricopeptide repeat (TPR)-like superfamily protein0.91positive
GWHGAAZE009931AT5G17310.2UDP-glucose pyrophosphorylase 20.91positive
GWHGAAZE020457AT5G33393.1hypothetical protein;(source:Araport11)0.9positive
GWHGAAZE030372AT2G01190.1Octicosapeptide/Phox/Bem1p family protein0.9positive
GWHGAAZE027275AT5G55110.1Stigma-specific Stig1 family protein0.89positive
GWHGAAZE024516AT3G02645.1Plant protein of unknown function (DUF247)0.89positive
GWHGAAZE032697AT1G51850.1Leucine-rich repeat protein kinase family protein0.89positive
GWHGAAZE011407AT3G06240.1F-box family protein0.89positive
GWHGAAZE017636AT5G50915.2basic helix-loop-helix (bHLH) DNA-binding superfamily protein0.89positive
GWHGAAZE032699AT4G29990.1Leucine-rich repeat transmembrane protein kinase protein0.88positive
GWHGAAZE023808AT2G07505.1zinc ion binding0.88positive
GWHGAAZE001434AT4G38180.1FAR1-related sequence 50.88positive
GWHGAAZE012304AT3G17100.2sequence-specific DNA binding transcription factors0.88positive
GWHGAAZE019814AT1G47890.1receptor like protein 70.87positive
GWHGAAZE023829AT2G34930.1disease resistance family protein / LRR family protein0.87positive
GWHGAAZE031484AT5G24090.1chitinase A0.87positive
GWHGAAZE001435AT1G59830.1protein phosphatase 2A-20.87positive
GWHGAAZE000589AT5G57260.1cytochrome P450, family 71, subfamily B, polypeptide 100.87positive
GWHGAAZE001679AT1G77650.1F-box associated ubiquitination effector family protein0.87positive
GWHGAAZE032933AT4G12010.1Disease resistance protein (TIR-NBS-LRR class) family0.87positive
GWHGAAZE004498AT1G17020.1senescence-related gene 10.86positive
GWHGAAZE008720AT3G01345.1Expressed protein0.86positive
GWHGAAZE019737AT1G52340.1NAD(P)-binding Rossmann-fold superfamily protein0.86positive
GWHGAAZE022686AT3G25620.2ABC-2 type transporter family protein0.86positive
GWHGAAZE026598AT2G39980.1HXXXD-type acyl-transferase family protein0.86positive
GWHGAAZE029856AT5G10530.1Concanavalin A-like lectin protein kinase family protein0.86positive
GWHGAAZE028163AT5G15340.1Pentatricopeptide repeat (PPR) superfamily protein0.86positive


Expression profiling, GSEA and motif analysis