LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE033932

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE033932

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE033932AT1G02205.2Fatty acid hydroxylase superfamily1positive
GWHGAAZE033931AT1G02205.2Fatty acid hydroxylase superfamily0.95positive
GWHGAAZE030201AT2G16910.1basic helix-loop-helix (bHLH) DNA-binding superfamily protein0.93positive
GWHGAAZE007115AT3G21090.1ABC-2 type transporter family protein0.92positive
GWHGAAZE002306AT4G15210.1beta-amylase 50.92positive
GWHGAAZE031513AT4G09510.1cytosolic invertase 20.92positive
GWHGAAZE003401----0.91positive
GWHGAAZE018653AT4G37760.1squalene epoxidase 30.91positive
GWHGAAZE005341AT5G01750.2Protein of unknown function (DUF567)0.9positive
GWHGAAZE011573AT4G26740.1seed gene 10.9positive
GWHGAAZE003605AT3G16520.3UDP-glucosyl transferase 88A10.89positive
GWHGAAZE000113AT3G14240.1Subtilase family protein0.89positive
GWHGAAZE003407AT5G07440.2glutamate dehydrogenase 20.89positive
GWHGAAZE009738AT1G03055.1Encodes the ortholog of rice D27. It is plastid-localized and is required for the inhibition of secondary bud outgrowth and operates on a nonmobile precursor upstream of MAX1 in the SL biosynthesis pathway.0.88positive
GWHGAAZE031541AT2G46770.1NAC (No Apical Meristem) domain transcriptional regulator superfamily protein0.88positive
GWHGAAZE005454AT5G01220.1sulfoquinovosyldiacylglycerol 20.88positive
GWHGAAZE027999AT1G31880.1DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein0.88positive
GWHGAAZE014772AT1G64830.1Eukaryotic aspartyl protease family protein0.88positive
GWHGAAZE021305AT5G33340.1Eukaryotic aspartyl protease family protein0.87positive
GWHGAAZE001145AT3G52525.1ovate family protein 60.87positive
GWHGAAZE032332AT2G13820.1Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein0.87positive
GWHGAAZE028390AT5G36110.1cytochrome P450, family 716, subfamily A, polypeptide 10.87positive
GWHGAAZE029731AT2G13820.1Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein0.86positive
GWHGAAZE014775AT5G38200.1Class I glutamine amidotransferase-like superfamily protein0.86positive
GWHGAAZE013841AT5G42250.1Zinc-binding alcohol dehydrogenase family protein0.86positive
GWHGAAZE029779AT1G47670.1Transmembrane amino acid transporter family protein0.86positive


Expression profiling, GSEA and motif analysis