Eukaryota
+--Amoebozoa
| +--Mycetozoa
| +--Dictyosteliida
| +--Dictyostelium
| +--Dictyostelium discoideum (2)
+--Viridiplantae
| +--Chlorophyta
| | +--Chlorophyceae
| | +--Chlamydomonadales
| | +--Chlamydomonadaceae
| | +--Chlamydomonas
| | +--Chlamydomonas reinhardtii (84)
| +--Streptophyta
| +--Streptophytina
| +--Embryophyta
| +--Bryophyta
| | +--Moss Superclass V
| | +--Bryopsida
| | +--Funariidae
| | +--Funariales
| | +--Funariaceae
| | +--Physcomitrella
| | +--Physcomitrella patens (282)
| +--Tracheophyta
| +--Euphyllophyta
| | +--Spermatophyta
| | +--Coniferophyta
| | | +--Coniferopsida
| | | +--Coniferales
| | | +--Pinaceae
| | | +--Picea
| | | | +--Picea glauca (white spruce) (5)
| | | | +--Picea sitchensis (Sitka spruce)(3)
| | | +--Pinus
| | | +--Pinus
| | | +--Pinus taeda (loblolly pine) (40)
| | +--Cycadophyta
| | | +--Cycadopsida
| | | +--Cycadales
| | | +--Cycadaceae
| | | +--Cycas
| | | +--Cycas rumphii (1)
| | +--Magnoliophyta
| | +--basal Magnoliophyta
| | | +--Nymphaeales
| | | +--Nymphaeaceae
| | | +--Nuphar
| | | +--Nuphar advena (3)
| | +--eudicotyledons
| | | +--core eudicotyledons
| | | | +--asterids
| | | | | +--campanulids
| | | | | | +--Asterales
| | | | | | +--Asteraceae
| | | | | | +--Asteroideae
| | | | | | | +--Heliantheae
| | | | | | | +--Helianthus
| | | | | | | | +--Helianthus annuus (common sunflower) (3)
| | | | | | | +--Zinnia
| | | | | | | +--Zinnia elegans (3)
| | | | | | +--Cichorioideae
| | | | | | +--Cichorieae
| | | | | | +--Lactuca
| | | | | | +--Lactuca sativa (garden lettuce) (3)
| | | | | +--lamiids
| | | | | +--Gentianales
| | | | | | +--Rubiaceae
| | | | | | +--Rubioideae
| | | | | | +--Spermacoceae
| | | | | | +--Hedyotis
| | | | | | +--Hedyotis centranthoides (3)
| | | | | | +--Hedyotis terminalis (1)
| | | | | +--Lamiales
| | | | | | +--Pedaliaceae
| | | | | | | +--Sesamum
| | | | | | | +--Sesamum indicum (sesame) (2)
| | | | | | +--Plantaginaceae
| | | | | | +--Antirrhineae
| | | | | | +--Antirrhinum
| | | | | | +--Antirrhinum majus (snapdragon) (1)
| | | | | +--Solanales
| | | | | +--Convolvulaceae
| | | | | | +--Ipomoeeae
| | | | | | +--Ipomoea
| | | | | | +--Ipomoea batatas (sweet potato) (1)
| | | | | | +--Ipomoea nil (Japanese morning glory) (5)
| | | | | +--Solanaceae
| | | | | +--Nicotianoideae
| | | | | | +--Nicotianeae
| | | | | | +--Nicotiana
| | | | | | +--Nicotiana benthamiana (4)
| | | | | | +--Nicotiana sylvestris (wood tobacco) (1)
| | | | | | +--Nicotiana tabacum (common tobacco) (1)
| | | | | +--Petunioideae
| | | | | | +--Petunia
| | | | | | +--Petunia x hybrida (garden petunia) (1)
| | | | | +--Solanoideae
| | | | | +--Capsiceae
| | | | | | +--Capsicum
| | | | | | +--Capsicum annuum (3)
| | | | | +--Solaneae
| | | | | +--Solanum
| | | | | +--Solanum demissum (1)
| | | | | +--Solanum tuberosum (potato) (14)
| | | | | +--Lycopersicon
| | | | | +--Solanum lycopersicum (tomato) (37)
| | | | +--rosids
| | | | | +--eurosids I
| | | | | | +--Fabales
| | | | | | | +--Fabaceae
| | | | | | | +--Papilionoideae
| | | | | | | +--Dalbergieae
| | | | | | | | +--Arachis
| | | | | | | | +--Arachis hypogaea (peanut) (36)
| | | | | | | +--Genisteae
| | | | | | | | +--Lupinus
| | | | | | | | +--Lupinus luteus (yellow lupine) (1)
| | | | | | | +--Loteae
| | | | | | | | +--Lotus
| | | | | | | | +--Lotus japonicus (10)
| | | | | | | +--Phaseoleae
| | | | | | | | +--Glycine
| | | | | | | | | +--Glycine clandestina (twining glycine) (3)
| | | | | | | | | +--Glycine max (soybean) (229)
| | | | | | | | | +--Glycine soja (wild soybean) (16)
| | | | | | | | +--Phaseolus
| | | | | | | | | +--Phaseolus coccineus (scarlet runner bean) (2)
| | | | | | | | | +--Phaseolus vulgaris (kidney bean) (10)
| | | | | | | | +--Vigna
| | | | | | | | | +--Vigna unguiculata (cowpea) (3)
| | | | | | | +--Trifolieae
| | | | | | | +--Medicago
| | | | | | | | +--Medicago truncatula (barrel medic) (395)
| | | | | | | +--Trifolium
| | | | | | | +--Trifolium repens (white clover) (1)
| | | | | | +--Fagales
| | | | | | | +--Betulaceae
| | | | | | | +--Corylus
| | | | | | | +--Corylus avellana (European hazelnut) (1)
| | | | | | +--Malpighiales
| | | | | | | +--Euphorbiaceae
| | | | | | | | +--Acalyphoideae
| | | | | | | | | +--Acalypheae
| | | | | | | | | +--Ricinus
| | | | | | | | | +--Ricinus communis (castor bean) (63)
| | | | | | | | +--Crotonoideae
| | | | | | | | +--Manihoteae
| | | | | | | | +--Manihot
| | | | | | | | +--Manihot esculenta (cassava) (1)
| | | | | | | +--Salicaceae
| | | | | | | +--Saliceae
| | | | | | | +--Populus
| | | | | | | +--Populus euphratica (8)
| | | | | | | +--Populus tremula (European aspen) (4)
| | | | | | | +--Populus tremula x Populus tremuloides (6)
| | | | | | | +--Populus tremuloides (quaking aspen) (7)
| | | | | | | +--Populus trichocarpa (western balsam poplar) (2780)
| | | | | | | +--Populus trichocarpa x Populus deltoides (5)
| | | | | | +--Rosales
| | | | | | +--Rosaceae
| | | | | | +--Amygdaloideae
| | | | | | | +--Prunus
| | | | | | | +--Prunus armeniaca (apricot) (2)
| | | | | | | +--Prunus persica (peach) (3)
| | | | | | | +--Prunus salicina (Japanese plum) (1)
| | | | | | +--Maloideae
| | | | | | +--Malus
| | | | | | +--Malus x domestica (apple) (5)
| | | | | +--eurosids II
| | | | | +--Brassicales
| | | | | | +--Brassicaceae
| | | | | | | +--Alliaria
| | | | | | | | +--Alliaria petiolata (garlic mustard) (1)
| | | | | | | +--Arabidopsis
| | | | | | | | +--Arabidopsis arenosa (1)
| | | | | | | | +--Arabidopsis cebennensis (1)
| | | | | | | | +--Arabidopsis halleri (1)
| | | | | | | | +--Arabidopsis thaliana (thale cress) (1441)
| | | | | | | +--Arabis
| | | | | | | | +--Arabis hirsuta (hairy rockcress) (1)
| | | | | | | +--Barbarea
| | | | | | | | +--Barbarea vulgaris (winter cress) (1)
| | | | | | | +--Boechera
| | | | | | | | +--Boechera stricta (1)
| | | | | | | +--Brassica
| | | | | | | | +--Brassica napus (rape) (49)
| | | | | | | | +--Brassica oleracea (9)
| | | | | | | | +--Brassica rapa (field mustard) (24)
| | | | | | | +--Camelina
| | | | | | | | +--Camelina microcarpa (1)
| | | | | | | +--Capsella
| | | | | | | | +--Capsella rubella (1)
| | | | | | | +--Conringia
| | | | | | | | +--Conringia orientalis (hare's-ear mustard) (1)
| | | | | | | +--Descurainia
| | | | | | | | +--Descurainia sophia (1)
| | | | | | | +--Erysimum
| | | | | | | | +--Erysimum cheiri (wallflower) (1)
| | | | | | | +--Fourraea
| | | | | | | | +--Fourraea alpina (1)
| | | | | | | +--Malcolmia
| | | | | | | | +--Malcolmia maritima (1)
| | | | | | | +--Nasturtium
| | | | | | | | +--Nasturtium officinale (watercress) (1)
| | | | | | | +--Rorippa
| | | | | | | | +--Rorippa indica (1)
| | | | | | | +--Sibara
| | | | | | | | +--Sibara virginica (Virginia winged rockcress) (1)
| | | | | | | +--Thlaspi
| | | | | | | +--Thlaspi arvense (1)
| | | | | | +--Caricaceae
| | | | | | +--Carica
| | | | | | +--Carica papaya (papaya) (2)
| | | | | +--Malvales
| | | | | | +--Malvaceae
| | | | | | +--Byttnerioideae
| | | | | | | +--Theobroma
| | | | | | | +--Theobroma cacao (cacao) (1)
| | | | | | +--Malvoideae
| | | | | | +--Gossypium
| | | | | | +--Gossypium arboreum (tree cotton) (3)
| | | | | | +--Gossypium herbaceum (Arabian cotton) (4)
| | | | | | +--Gossypium hirsutum (upland cotton) (69)
| | | | | | +--Gossypium raimondii (13)
| | | | | +--Sapindales
| | | | | +--Rutaceae
| | | | | +--Citrus
| | | | | | +--Citrus clementina (1)
| | | | | | +--Citrus sinensis (apfelsine) (13)
| | | | | +--Citrus x Poncirus
| | | | | +--Citrus x paradisi x Poncirus trifoliata (4)
| | | | +--Vitales
| | | | +--Vitaceae
| | | | +--Vitis
| | | | +--Vitis vinifera (wine grape) (144)
| | | +--stem eudicotyledons
| | | +--Ranunculales
| | | +--Papaveraceae
| | | | +--Eschscholzioideae
| | | | +--Eschscholzia
| | | | +--Eschscholzia californica (California poppy) (1)
| | | +--Ranunculaceae
| | | +--Aquilegia
| | | +--Aquilegia coerulea (45)
| | +--Liliopsida
| | | +--Asparagales
| | | | +--Alliaceae
| | | | +--Allium
| | | | +--Allium cepa (onion) (7)
| | | +--commelinids
| | | +--Arecales
| | | | +--Arecaceae
| | | | +--Arecoideae
| | | | +--Euterpeae
| | | | +--Oenocarpus
| | | | +--Oenocarpus bataua (1)
| | | +--Poales
| | | +--Poaceae
| | | +--BEP clade
| | | | +--Ehrhartoideae
| | | | | +--Oryzeae
| | | | | +--Oryza
| | | | | +--Oryza barthii (African wild rice) (1)
| | | | | +--Oryza brachyantha (1)
| | | | | +--Oryza nivara (1)
| | | | | +--Oryza rufipogon (common wild rice) (6)
| | | | | +--Oryza sativa (rice) (2641)
| | | | +--Pooideae
| | | | +--Brachypodieae
| | | | | +--Brachypodium
| | | | | +--Brachypodium distachyon (purple false brome) (31)
| | | | | +--Brachypodium sylvaticum (false brome) (1)
| | | | +--Poeae
| | | | | +--Alopecurinae
| | | | | | +--Phleum
| | | | | | +--Phleum pratense (timothy grass) (1)
| | | | | +--Aveninae
| | | | | | +--Avena
| | | | | | +--Avena sativa (oat) (1)
| | | | | +--Loliinae
| | | | | +--Festuca
| | | | | | +--Festuca arundinacea (tall fescue) (1)
| | | | | +--x Festulolium
| | | | | +--Festuca glaucescens x Lolium multiflorum (1)
| | | | +--Triticeae
| | | | | +--Aegilops
| | | | | | +--Aegilops speltoides (1)
| | | | | | +--Aegilops tauschii (2)
| | | | | +--Australopyrum
| | | | | | +--Australopyrum velutinum (1)
| | | | | +--Henrardia
| | | | | | +--Henrardia persica (1)
| | | | | +--Heteranthelium
| | | | | | +--Heteranthelium piliferum (1)
| | | | | +--Hordeum
| | | | | | +--Hordeum vulgare (barley) (1)
| | | | | | +--Hordeum vulgare subsp. Spontaneum (wild barley) (1)
| | | | | | +--Hordeum vulgare subsp. Vulgare (domesticated barley) (16)
| | | | | +--Peridictyon
| | | | | +--Peridictyon sanctum (1)
| | | | +--Secale
| | | | | +--Secale cereale (rye) (1)
| | | | +--Triticum
| | | | +--Triticum aestivum (bread wheat) (85)
| | | | +--Triticum monococcum (einkorn wheat) (2)
| | | | +--Triticum turgidum (poulard whea) (2)
| | | | +--Triticum urartu (2)
| | | +--PACCAD clade
| | | +--Panicoideae
| | | +--Andropogoneae
| | | | +--Saccharum
| | | | | +--Saccharum sp (2)
| | | | | +--Saccharum officinarum complex
| | | | | +--Saccharum officinarum (noble cane) (32)
| | | | +--Sorghum
| | | | | +--Sorghum bicolor (sorghum) (150)
| | | | | +--Sorghum propinquum (2)
| | | | +--Zea
| | | | +--Zea mays (maize) (269)
| | | +--Paniceae
| | | +--Panicum
| | | | +--Panicum virgatum (switchgrass) (1)
| | | +--Pennisetum
| | | +--Pennisetum ciliare (1)
| | | +--Pennisetum glaucum (pearl millet) (1)
| | +--magnoliids
| | +--Laurales
| | | +--Lauraceae
| | | +--Persea
| | | +--Persea americana (avocado) (1)
| | +--Magnoliales
| | +--Annonaceae
| | | +--Annona
| | | +--Annona cherimola (cherimoya) (1)
| | +--Magnoliaceae
| | +--Liriodendron
| | +--Liriodendron tulipifera (2)
| +--Lycopodiophyta
| +--Isoetopsida
| +--Selaginellales
| +--Selaginellaceae
| +--Selaginella
| +--Selaginella moellendorffii (64)
+--unclassified eukaryotes
+--mixed EST libraries
+--Schedonorus arundinaceus (1)
|