CFinderM000107's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
diaminopimelate epimerase activity,0.004774555GO:0008837
pyrroline-5-carboxylate reductase activity,0.004774555GO:0004735
translation,0.011017937GO:0006412
proline biosynthetic process,0.011017937GO:0006561
lysine biosynthetic process via diaminopimelate,0.011017937GO:0009089
eukaryotic translation elongation factor 1 complex,0.012495898GO:0005853
translational elongation,0.020629596GO:0006414
cellular protein modification process,0.021439698GO:0006464
Lysine_biosynthesis0.028093808KEGG
intracellular,0.030492923GO:0005622
translation elongation factor activity,0.039716515GO:0003746

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000102G0440ubiquitin-protein ligase 1AT1G55860 (0)
PH01000158G0110Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6AT1G30230 (1.50E-72)
PH01000274G1080Ribosomal L5P family proteinAT5G45775 (5.10E-88)
PH01000362G0600methyltransferases;copper ion bindingAT1G64600 (7.00E-155)
PH01000570G0430diaminopimelate epimerase family proteinAT3G53580 (3.00E-132)
PH01001739G0230pyrroline-5- carboxylate (P5C) reductaseAT5G14800 (1.00E-100)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000068cellular protein modification process,
ubiquitin-protein ligase activity,
Ubiquitin_mediated_proteolysis
binding,
intracellular,
protein binding,
CE8 Carbohydrate_Esterases
GH28 Glycoside_Hydrolases
Alfin-like Transcription_Regulator(from iTAK)
SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
TORC1_complex
details
CFinderM000146cellular protein modification process,
intracellular,
Ubiquitin_mediated_proteolysis
details
CFinderM000227Valine,_leucine_and_isoleucine_biosynthesis
COPII_vesicle_coating
intracellular,
translational elongation,
details
CFinderM000284cellular protein modification process,
Ubiquitin_mediated_proteolysis
intracellular,
ubiquitin-protein ligase activity,
binding,
details
CFinderM000353intracellular,
cellular protein modification process,
Ubiquitin_mediated_proteolysis
Ribosome
ubiquitin-protein ligase activity,
Ribosome
translation,
methylation,
translational initiation,
nucleobase-containing compound metabolic process,
RNA_polymerase
structural constituent of ribosome,
transcription, DNA-dependent,
details
CFinderM000687Ubiquitin_mediated_proteolysis
GH35 Glycoside_Hydrolases

cullin-RING ubiquitin ligase complex,
Nucleotide_excision_repair
metallocarboxypeptidase activity,
details
CFinderM000769cellular protein modification process,
Ubiquitin_mediated_proteolysis
ubiquitin-protein ligase activity,
intracellular,
binding,
carbon-sulfur lyase activity,
details
CFinderM000911intracellular,
Ribosome
translation,
PHD Transcription_Regulator(from iTAK)
structural constituent of ribosome,
protein import into nucleus,
details

4.Expression profilings