CFinderM000170's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cullin-RING ubiquitin ligase complex,0.005892974GO:0031461
ubiquitin protein ligase binding,0.005892974GO:0031625
ubiquitin-dependent protein catabolic process,0.029381521GO:0006511

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000736G0020-- (-)
PH01000744G0360-- (-)
PH01000863G0530cullin 1AT4G02570 (1.50E-32)
PH01001665G0350-- (-)
PH01001872G0090LisH/CRA/RING-U-box domains-containing proteinAT4G37880 (2.00E-30)
PH01003505G0200Protein of unknown function (DUF1682)AT4G24330 (6.00E-117)
PH01004063G0040-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000229GT2 GlycosylTransferases
NuA4_histone_acetyltransferase_complex
histone_H2A_acetylation
protein homooligomerization,
histone_H4_acetylation
chromatin remodeling,
negative_regulation_of_transcription,_DNA-templated
RNA modification,
pseudouridine synthesis,
details
CFinderM000389protein folding,
response to heat,
unfolded protein binding,
details
CFinderM000453carbon fixation,
response to wounding,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
details
CFinderM000501oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
Peroxisome
N-Glycan_biosynthesis
details
CFinderM000540condensin_complex
CK1_CK1 (from iTAK)
mitotic_chromosome_condensation
details
CFinderM000627DNA primase activity,
DNA_replication
details
CFinderM000731cellular metabolic process,
details
CFinderM000734WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
details
CFinderM000853details
CFinderM001015DNA primase activity,
details
CFinderM001203SNARE_interactions_in_vesicular_transport
ubiquitin-dependent protein catabolic process,
details
CFinderM001242mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
details
CFinderM001248DNA primase activity,
details
CFinderM001253CMGC_CLK (from iTAK)
membrane,
details
CFinderM001261thymidylate synthase activity,
dihydrofolate reductase activity,
dTMP biosynthetic process,
ribosome biogenesis,
nucleotidyltransferase activity,
details
CFinderM001360cysteine-type peptidase activity,
galactosyltransferase activity,
protein glycosylation,
details
CFinderM001424WASH_complex
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
Peroxisome
details
CFinderM001581WASH_complex
DNA_ligation_involved_in_DNA_repair
drug_binding
DNA_ligase_activity
DNA ligase (ATP) activity,
DNA recombination,
DNA repair,
details
CFinderM001799Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings