CFinderM000178's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cellular glucan metabolic process,7.78E-05GO:0006073
xyloglucan:xyloglucosyl transferase activity,0.000308404GO:0016762
cell wall,0.000383704GO:0005618
apoplast,0.000436822GO:0048046
GH16 Glycoside_Hydrolases0.002296384GFam
WRKY Transcription_Regulator(from PlantTFDB)0.036257545GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000021G1460-- (-)
PH01000038G1850Target SNARE coiled-coil domain proteinAT4G14600 (2.60E-34)
PH01000061G0880-AT2G12462 (7.20E-18)
PH01000069G1060S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT5G14430 (0.00E+00)
PH01000080G1130Phosphate-responsive 1 family proteinAT4G08950 (2.10E-77)
PH01000152G1100xyloglucan endotransglycosylase 6AT4G25810 (4.10E-85)
PH01000254G0870Calcium-binding EF-hand family proteinAT3G25600 (2.30E-51)
PH01000256G0560calcium-dependent protein kinase 6AT4G23650 (0.00E+00)
PH01000343G0910Plant protein of unknown function (DUF828) with plant pleckstrin homology-like regionAT4G17350 (1.00E-54)
PH01000362G0340RHOMBOID-like 2AT1G63120 (3.30E-85)
PH01000367G0090ETO1-like 1AT4G02680 (0.00E+00)
PH01000386G0730RNA-binding (RRM/RBD/RNP motifs) family proteinAT4G17720 (1.00E-87)
PH01000407G0230Polynucleotidyl transferase, ribonuclease H-like superfamily proteinAT5G22250 (2.50E-41)
PH01000410G0800calmodulin-binding family proteinAT4G33050 (1.00E-140)
PH01000474G0460-- (-)
PH01000659G0050-- (-)
PH01000712G0320-- (-)
PH01001005G0510-- (-)
PH01001056G0170Basic-leucine zipper (bZIP) transcription factor family proteinAT4G38900 (1.90E-38)
PH01001184G0580calmodulin 7AT3G43810 (6.90E-81)
PH01001206G0170Cellulose-synthase-like C12AT4G07960 (0.00E+00)
PH01001338G0260Cellulose-synthase-like C12AT4G07960 (0)
PH01001678G0190actin bindingAT5G58160 (2.00E-112)
PH01001707G0480HCO3- transporter familyAT1G15460 (0.00E+00)
PH01001976G0230xyloglucan endotransglycosylase 6AT4G25810 (1.40E-83)
PH01001976G0240Xyloglucan endotransglucosylase/hydrolase family proteinAT5G57560 (7.00E-111)
PH01002043G0150Protein phosphatase 2C family proteinAT1G47380 (1.00E-132)
PH01002115G0080galacturonosyltransferase 7AT2G38650 (2.00E-149)
PH01002362G0210-- (-)
PH01002369G0120Protein phosphatase 2C family proteinAT1G68410 (8.00E-136)
PH01002838G0190-- (-)
PH01003922G0080WRKY family transcription factorAT4G23810 (4.60E-28)
PH01005423G0030-AT5G12900 (1.00E-125)
PH01005712G0040SKU5 similar 17AT5G66920 (0.00E+00)
PH01006194G0010-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000058cysteamine dioxygenase activity,
LBD Transcription_Regulator(from PlantTFDB)
oxidation-reduction process,
Taurine_and_hypotaurine_metabolism
details
CFinderM000187Biotin_metabolism
Fatty_acid_biosynthesis
details
CFinderM000207anion transport,
GT8 GlycosylTransferases
RLK-Pelle_LRR-XI-1 (from iTAK)
inorganic anion exchanger activity,
details
CFinderM000310Glycine,_serine_and_threonine_metabolism
flavin adenine dinucleotide binding,
oxidoreductase activity, acting on CH-OH group of donors,
Biotin_metabolism
oxidation-reduction process,
alcohol metabolic process,
details
CFinderM000359defense response,
calcium_ion_transmembrane_transport
GT31 GlycosylTransferases
CAMK_CDPK (from iTAK)
details
CFinderM000752details
CFinderM001417STE_STE11 (from iTAK)
CAMK_CDPK (from iTAK)
Starch_and_sucrose_metabolism
cell wall macromolecule catabolic process,
trehalose biosynthetic process,
details

4.Expression profilings


Show details about module gene expression profiling