CFinderM000323's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Diterpenoid_biosynthesis0.006184019KEGG
Lysine_degradation0.008980189KEGG
SET Transcription_Regulator(from iTAK)0.009341217GFam
histone_methylation0.010307504GO:0016571
electron carrier activity,0.010829741GO:0009055
heme binding,0.010829741GO:0020037
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,0.010829741GO:0016705
iron ion binding,0.010829741GO:0005506
histone_lysine_methylation0.011327628GO:0034968
histone_binding0.016286512GO:0042393
histone-lysine N-methyltransferase activity,0.017635451GO:0018024
oxidation-reduction process,0.037542662GO:0055114

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000240G0950-- (-)
PH01000556G0480SU(VAR)3-9 homolog 1AT5G04940 (1.00E-157)
PH01000853G0290Mob1/phocein family proteinAT5G45550 (6.00E-119)
PH01001810G0360Tetratricopeptide repeat (TPR)-like superfamily proteinAT5G21990 (2.00E-153)
PH01003089G0010GA requiring 3AT5G25900 (3.50E-29)
PH01010104G0010GA requiring 3AT5G25900 (1.70E-49)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000163SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
nucleus,
RNA-directed RNA polymerase activity,
zinc ion binding,
histone_binding
histone-lysine N-methyltransferase activity,
details
CFinderM000341exosome_(RNase_complex)
COP9_signalosome
details
CFinderM000693ornithine_metabolic_process
histone deacetylation,
protein import into nucleus,
ornithine carbamoyltransferase activity,
carboxyl- or carbamoyltransferase activity,
histone deacetylase activity,
Arginine_and_proline_metabolism
cellular amino acid metabolic process,
protein transporter activity,
amino acid binding,
details
CFinderM001014SET Transcription_Regulator(from iTAK)
endoplasmic reticulum,
nucleus,
ubiquitin ligase complex,
histone_methylation
details
CFinderM001101SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
Lysine_degradation
nucleus,
ubiquitin ligase complex,
histone-lysine N-methyltransferase activity,
histone_binding
RNA_degradation
transcription, DNA-dependent,
protein ubiquitination,
details
CFinderM001149ketol-acid reductoisomerase activity,
branched chain family amino acid biosynthetic process,
cellular amino acid biosynthetic process,
SCY1_SCYL2 (from iTAK)
coenzyme binding,
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,
Endocytosis
details
CFinderM001362Protein_processing_in_endoplasmic_reticulum
mannose biosynthetic process,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
phosphomannomutase activity,
histone_lysine_methylation
details
CFinderM001488STAT Transcription_Regulator(from PlantTFDB)
TKL-Pl-5 (from iTAK)
Lysine_degradation
nucleus,
chloroplast,
SET Transcription_Regulator(from iTAK)
histone_methylation
mRNA processing,
histone_lysine_methylation
details
CFinderM001705Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
histone_lysine_methylation
chloroplast,
histone-lysine N-methyltransferase activity,
histone_binding
ubiquitin-dependent protein catabolic process,
details

4.Expression profilings