|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | 0.00150007 | KEGG | | L-phenylalanine biosynthetic process, | 0.028518036 | GO:0009094 | | regulation of ARF GTPase activity, | 0.032749142 | GO:0032312 | | Endocytosis | 0.036000876 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000056G1870 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT5G47820 (0.00E+00) | | PH01000120G1090 | Calcium-dependent ARF-type GTPase activating protein family | AT4G21160 (4.40E-93) | | PH01000758G0280 | Secretory carrier membrane protein (SCAMP) family protein | AT2G20840 (1.80E-69) | | PH01001010G0030 | arogenate dehydratase 2 | AT3G07630 (3.00E-108) | | PH01002230G0270 | RNA binding;abscisic acid binding | AT4G16280 (5.10E-90) | | PH01003367G0200 | O-fucosyltransferase family protein | AT1G14020 (3.00E-174) | | PH01004961G0020 | alpha/beta-Hydrolases superfamily protein | AT4G10955 (5.70E-81) | | PH01071576G0010 | - | - (-) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000013 | cellulose biosynthetic process,
cellulose synthase (UDP-forming) activity,
response to oxidative stress,
extracellular polysaccharide biosynthetic process,
hydrolase activity, hydrolyzing O-glycosyl compounds,
carbohydrate metabolic process,
| details | | CFinderM000783 | carbohydrate metabolic process,
CE13 Carbohydrate_Esterases
hydrolase activity, hydrolyzing O-glycosyl compounds,
| details | | CFinderM001027 | RLK-Pelle_SD-2b (from iTAK)
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
Methane_metabolism
| details | | CFinderM001037 | RLK-Pelle_LRR-VI-1 (from iTAK)
microtubule associated complex,
regulation of ARF protein signal transduction,
| details | | CFinderM001073 | | details | | CFinderM001114 | MYB Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001135 | | details | | CFinderM001136 | regulation of ARF protein signal transduction,
DNA integration,
ARF guanyl-nucleotide exchange factor activity,
| details | | CFinderM001196 | nitronate monooxygenase activity,
intramolecular transferase activity,
| details | | CFinderM001251 | NAK (from iTAK)
magnesium_ion_transport
magnesium_ion_transmembrane_transporter_activity
triglyceride lipase activity,
lipid metabolic process,
glycopeptide_alpha-N-acetylgalactosaminidase_activity
membrane,
| details | | CFinderM001255 | GT77 GlycosylTransferases
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
succinate-CoA ligase (ADP-forming) activity,
ATP citrate synthase activity,
Carbon_fixation_pathways_in_prokaryotes
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
prephenate dehydratase activity,
Citrate_cycle_(TCA_cycle)
| details | | CFinderM001456 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
L-phenylalanine biosynthetic process,
microtubule associated complex,
microtubule-based movement,
prephenate dehydratase activity,
| details | | CFinderM001475 | cellulose biosynthetic process,
intramolecular transferase activity,
| details | | CFinderM001697 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
L-phenylalanine biosynthetic process,
cellular carbohydrate metabolic process,
peptide-methionine-(S)-S-oxide reductase activity,
prephenate dehydratase activity,
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
Carbon_fixation_pathways_in_prokaryotes
cofactor binding,
Citrate_cycle_(TCA_cycle)
| details | | CFinderM001784 | RLK-Pelle_RLCK-V (from iTAK)
COPI vesicle coat,
membrane coat,
Spliceosome
| details |
4.Expression profilings |
