CFinderM000389's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein folding,0.001570661GO:0006457
response to heat,0.030367076GO:0009408
unfolded protein binding,0.038924021GO:0051082

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000068G1660GTP-binding protein-relatedAT4G39520 (0.00E+00)
PH01000083G1700gametophytic factor 2AT5G48030 (1.40E-85)
PH01000324G0490-- (-)
PH01000352G0150Transducin/WD40 repeat-like superfamily proteinAT4G29860 (9.60E-93)
PH01000367G0550galacturonosyltransferase 6AT1G06780 (4.00E-129)
PH01000514G0160P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT5G62760 (4.50E-87)
PH01000804G0400S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT5G01470 (4.70E-64)
PH01000871G0650Drug/metabolite transporter superfamily proteinAT2G25520 (6.00E-134)
PH01000875G0370AAR2 protein familyAT1G66510 (1.00E-123)
PH01001096G0530rotamase FKBP 1AT3G25230 (3.00E-109)
PH01001117G0020Argonaute family proteinAT2G27880 (1.00E-170)
PH01001159G0150Chaperone protein htpG family proteinAT2G04030 (0.00E+00)
PH01001407G0470-- (-)
PH01002061G0050zinc ion bindingAT3G02860 (5.60E-45)
PH01002985G0130-- (-)
PH01003316G0100-- (-)
PH01003505G0200Protein of unknown function (DUF1682)AT4G24330 (6.00E-117)
PH01004401G0050Protein phosphatase 2C family proteinAT1G18030 (2.00E-108)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000170cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
ubiquitin-dependent protein catabolic process,
details
CFinderM000214outer membrane,
peptidase activity,
details
CFinderM000217glycerol ether metabolic process,
RNA-dependent DNA replication,
translational initiation,
RNA metabolic process,
RNA_transport
details
CFinderM000229GT2 GlycosylTransferases
NuA4_histone_acetyltransferase_complex
histone_H2A_acetylation
protein homooligomerization,
histone_H4_acetylation
chromatin remodeling,
negative_regulation_of_transcription,_DNA-templated
RNA modification,
pseudouridine synthesis,
details
CFinderM000379arginyl-tRNA aminoacylation,
arginine-tRNA ligase activity,
tRNA processing,
tRNA (guanine-N2-)-methyltransferase activity,
tRNA aminoacylation for protein translation,
double-stranded RNA binding,
details
CFinderM000426nucleus,
details
CFinderM000453carbon fixation,
response to wounding,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
details
CFinderM000501oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
Peroxisome
N-Glycan_biosynthesis
details
CFinderM000540condensin_complex
CK1_CK1 (from iTAK)
mitotic_chromosome_condensation
details
CFinderM000555details
CFinderM000627DNA primase activity,
DNA_replication
details
CFinderM000734WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
details
CFinderM001015DNA primase activity,
details
CFinderM001142details
CFinderM001201glycerol ether metabolic process,
Spliceosome
cell redox homeostasis,
details
CFinderM001203SNARE_interactions_in_vesicular_transport
ubiquitin-dependent protein catabolic process,
details
CFinderM001242mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
details
CFinderM001248DNA primase activity,
details
CFinderM001253CMGC_CLK (from iTAK)
membrane,
details
CFinderM001261thymidylate synthase activity,
dihydrofolate reductase activity,
dTMP biosynthetic process,
ribosome biogenesis,
nucleotidyltransferase activity,
details
CFinderM001295coenzyme M biosynthetic process,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001360cysteine-type peptidase activity,
galactosyltransferase activity,
protein glycosylation,
details
CFinderM001401Plant_hormone_signal_transduction
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001424WASH_complex
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
Peroxisome
details
CFinderM001581WASH_complex
DNA_ligation_involved_in_DNA_repair
drug_binding
DNA_ligase_activity
DNA ligase (ATP) activity,
DNA recombination,
DNA repair,
details
CFinderM001638tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
NAC Transcription_Regulator(from PlantTFDB)
details
CFinderM001799Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings


Show details about module gene expression profiling