CFinderM000504's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cytoplasm,0.004408172GO:0005737
microtubule associated complex,0.004408172GO:0005875
Pyruvate_metabolism0.010978217KEGG
Fatty_acid_biosynthesis0.010978217KEGG
Glycine,_serine_and_threonine_metabolism0.010978217KEGG
Valine,_leucine_and_isoleucine_degradation0.010978217KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000046G1830-AT1G64385 (2.40E-13)
PH01000083G0030vacuolar iron transporter (VIT) family proteinAT4G27860 (6.10E-31)
PH01000154G0790sulfoquinovosyldiacylglycerol 2AT5G01220 (3.00E-171)
PH01000158G1240CDPK-related kinaseAT3G50530 (0.00E+00)
PH01000180G0540-AT5G50350 (9.70E-37)
PH01000291G0960DNAJ heat shock family proteinAT2G20560 (1.80E-60)
PH01000299G0150Copine (Calcium-dependent phospholipid-binding protein) familyAT1G67800 (4.80E-70)
PH01000376G0170P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT3G49650 (0.00E+00)
PH01000439G0840Glycine cleavage T-protein familyAT4G12130 (3.00E-115)
PH01000609G0750microtubule-associated proteins 70-2AT1G24764 (0.00E+00)
PH01000700G0580Remorin family proteinAT4G36970 (1.30E-40)
PH01000743G0310Protein of unknown function (DUF3741)AT4G28760 (2.70E-95)
PH01000744G0380lipoamide dehydrogenase 1AT3G16950 (0.00E+00)
PH01000810G0380kinesin-like calmodulin-binding protein (ZWICHEL)AT5G65930 (1.00E-64)
PH01000895G0370-AT1G31870 (2.00E-117)
PH01001208G0080Pectin lyase-like superfamily proteinAT1G60590 (2.00E-166)
PH01001541G0190acetyl-CoA carboxylase 1AT1G36160 (0.00E+00)
PH01001580G0430Protein of unknown function (DUF3741)AT4G28760 (2.50E-86)
PH01001791G0390NAD(P)-binding Rossmann-fold superfamily proteinAT2G05990 (7.00E-114)
PH01002058G0270Afadin/alpha-actinin-binding proteinAT5G57410 (5.00E-141)
PH01002528G0290-- (-)
PH01002584G0300-- (-)
PH01002927G0090relative of early flowering 6AT3G48430 (2.00E-136)
PH01003854G0120DHHC-type zinc finger family proteinAT4G15080 (1.00E-146)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000254GNAT Transcription_Regulator(from iTAK)
GT47 GlycosylTransferases
HSF Transcription_Regulator(from PlantTFDB)
details
CFinderM000832Sphingolipid_metabolism
AUX/IAA Transcription_Regulator(from iTAK)
details
CFinderM000895protein kinase C-activating G-protein coupled receptor signaling pathway,
details
CFinderM000951S-methyl-5-thioribose kinase activity,
methionine biosynthetic process,
Cysteine_and_methionine_metabolism
details
CFinderM001037RLK-Pelle_LRR-VI-1 (from iTAK)
microtubule associated complex,
regulation of ARF protein signal transduction,
details
CFinderM001049microtubule associated complex,
microtubule-based movement,
microtubule motor activity,
PcG_protein_complex
F-actin capping protein complex,
Sesquiterpenoid_and_triterpenoid_biosynthesis
spindle pole,
WASH_complex
microtubule organizing center,
DNA polymerase III complex,
RLK-Pelle_RLCK-V (from iTAK)
CK1_CK1 (from iTAK)
Pantothenate_and_CoA_biosynthesis
macromolecule biosynthetic process,
details
CFinderM001182microtubule associated complex,
microtubule-based movement,
microtubule motor activity,
CAMK_CDPK (from iTAK)
phosphatidylinositol_dephosphorylation
potassium ion binding,
pyruvate kinase activity,
hydrolase activity, acting on glycosyl bonds,
details
CFinderM001183RLK-Pelle_LRR-VI-2 (from iTAK)
multicellular organismal development,
CAMK_CDPK (from iTAK)
details
CFinderM001263RLK-Pelle_LRR-VI-2 (from iTAK)
ribosome biogenesis,
hydrolase activity, acting on glycosyl bonds,
details
CFinderM001365HSF Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CRK7-CDK9 (from iTAK)
GT47 GlycosylTransferases
details
CFinderM001450tRNA processing,
details
CFinderM001573protein refolding,
histone_lysine_methylation
cellular protein metabolic process,
histone_binding
zinc ion binding,
histone-lysine N-methyltransferase activity,
C2H2 Transcription_Regulator(from PlantTFDB)
details
CFinderM001740Glycine,_serine_and_threonine_metabolism
aminomethyltransferase activity,
aspartate kinase activity,
Biotin_metabolism
Lysine_biosynthesis
glycine catabolic process,
cellular amino acid biosynthetic process,
Fatty_acid_biosynthesis
Cysteine_and_methionine_metabolism
details

4.Expression profilings


Show details about module gene expression profiling