CFinderM000587's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein binding,0.031228574GO:0005515
acid-amino acid ligase activity,0.031228574GO:0016881

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000177G0530pentatricopeptide (PPR) repeat-containing proteinAT1G74600 (1.00E-160)
PH01000181G1330ubiquitin-conjugating enzyme 32AT3G17000 (7.90E-92)
PH01000291G0430Pentatricopeptide repeat (PPR) superfamily proteinAT5G46460 (7.00E-178)
PH01000514G0680S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT5G26180 (3.90E-58)
PH01000547G0050Pentatricopeptide repeat (PPR) superfamily proteinAT3G49710 (0.00E+00)
PH01001918G0370Pentatricopeptide repeat (PPR-like) superfamily proteinAT5G37570 (2.00E-129)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000144protein binding,
acid-amino acid ligase activity,
details
CFinderM000940nucleic acid binding,
Ribosome_biogenesis_in_eukaryotes
details
CFinderM001079SOS_response
DNA metabolic process,
cellular protein metabolic process,
details
CFinderM001110Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
protein neddylation,
cellular protein modification process,
small protein activating enzyme activity,
details
CFinderM001131details
CFinderM001414PHD Transcription_Regulator(from iTAK)
details
CFinderM001415PHD Transcription_Regulator(from iTAK)
details
CFinderM001452'de novo' IMP biosynthetic process,
5-(carboxyamino)imidazole_ribonucleotide_mutase_activity
details
CFinderM001510Ribosome_biogenesis_in_eukaryotes
RNA processing,
acid-amino acid ligase activity,
details
CFinderM001519details
CFinderM001718phosphoribosyl-AMP cyclohydrolase activity,
histidine biosynthetic process,
RNA modification,
pseudouridine synthesis,
nuclear pore,
details

4.Expression profilings