CFinderM000687's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Ubiquitin_mediated_proteolysis0.001503327KEGG
GH35 Glycoside_Hydrolases0.003246244GFam
0.004124742GO:0030122 AP-2_adaptor_complex GOslim:cellular_co
cullin-RING ubiquitin ligase complex,0.018512678GO:0031461
Nucleotide_excision_repair0.024208796KEGG
metallocarboxypeptidase activity,0.03181694GO:0004181

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000019G2280Zn-dependent exopeptidases superfamily proteinAT5G42320 (1.00E-119)
PH01000102G0440ubiquitin-protein ligase 1AT1G55860 (0)
PH01000172G0330-- (-)
PH01000458G0760cullin4AT5G46210 (0.00E+00)
PH01001479G0370-- (-)
PH01001493G0410beta-galactosidase 15AT1G31740 (2.40E-54)
PH01002635G0220probable small nuclear ribonucleoprotein GAT2G23930 (1.10E-16)
PH01003184G0220-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000068cellular protein modification process,
ubiquitin-protein ligase activity,
Ubiquitin_mediated_proteolysis
binding,
intracellular,
protein binding,
CE8 Carbohydrate_Esterases
GH28 Glycoside_Hydrolases
Alfin-like Transcription_Regulator(from iTAK)
SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
TORC1_complex
details
CFinderM000107diaminopimelate epimerase activity,
pyrroline-5-carboxylate reductase activity,
translation,
proline biosynthetic process,
lysine biosynthetic process via diaminopimelate,
eukaryotic translation elongation factor 1 complex,
translational elongation,
cellular protein modification process,
Lysine_biosynthesis
intracellular,
translation elongation factor activity,
details
CFinderM000146cellular protein modification process,
intracellular,
Ubiquitin_mediated_proteolysis
details
CFinderM000284cellular protein modification process,
Ubiquitin_mediated_proteolysis
intracellular,
ubiquitin-protein ligase activity,
binding,
details
CFinderM000353intracellular,
cellular protein modification process,
Ubiquitin_mediated_proteolysis
Ribosome
ubiquitin-protein ligase activity,
Ribosome
translation,
methylation,
translational initiation,
nucleobase-containing compound metabolic process,
RNA_polymerase
structural constituent of ribosome,
transcription, DNA-dependent,
details
CFinderM000769cellular protein modification process,
Ubiquitin_mediated_proteolysis
ubiquitin-protein ligase activity,
intracellular,
binding,
carbon-sulfur lyase activity,
details
CFinderM000911intracellular,
Ribosome
translation,
PHD Transcription_Regulator(from iTAK)
structural constituent of ribosome,
protein import into nucleus,
details

4.Expression profilings