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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | phospholipid transport, | 8.17E-05 | GO:0015914 | | phospholipid-translocating ATPase activity, | 0.000276773 | GO:0004012 | | Glycine,_serine_and_threonine_metabolism | 0.001125158 | KEGG | | cation transport, | 0.001842541 | GO:0006812 | | cation-transporting_ATPase_activity | 0.002465588 | GO:0019829 | | magnesium ion binding, | 0.004414571 | GO:0000287 | | phosphoserine phosphatase activity, | 0.009332373 | GO:0004647 | | CAMK_CDPK (from iTAK) | 0.009713348 | GFam | | integral to membrane, | 0.010256665 | GO:0016021 | | L-serine biosynthetic process, | 0.012852251 | GO:0006564 | | metal ion binding, | 0.013619775 | GO:0046872 | | Methane_metabolism | 0.029575411 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000078G0190 | 3-phosphoserine phosphatase | AT1G18640 (1.20E-70) | | PH01000154G1170 | SH3 domain-containing protein | AT1G31440 (1.50E-92) | | PH01000222G0920 | 12-oxophytodienoate reductase 1 | AT1G76680 (2.00E-135) | | PH01000767G0700 | calcium dependent protein kinase 1 | AT5G04870 (1.00E-143) | | PH01001351G0140 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | AT1G68710 (0.00E+00) | | PH01003051G0100 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | AT1G68710 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000182 | 3-deoxy-7-phosphoheptulonate synthase activity,
aromatic amino acid family biosynthetic process,
Stilbenoid,_diarylheptanoid_and_gingerol_biosynthesis
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
sphingolipid metabolic process,
glucosylceramide catabolic process,
GH116 Glycoside_Hydrolases
Flavonoid_biosynthesis
| details | | CFinderM000899 | glucose-6-phosphate dehydrogenase activity,
glucose metabolic process,
galactosyltransferase activity,
NADP binding,
Glutathione_metabolism
Pentose_phosphate_pathway
Glycine,_serine_and_threonine_metabolism
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
Glycosaminoglycan_biosynthesis_-_chondroitin_sulfate_/_dermatan_sulfate
Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin
protein glycosylation,
phosphoserine phosphatase activity,
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides,
chorismate mutase activity,
chorismate metabolic process,
| details |
4.Expression profilings |
