|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | CMGC_DYRK-YAK (from iTAK) | 0.019512948 | GFam | | TKL-Pl-6 (from iTAK) | 0.027264416 | GFam |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000000G2970 | protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases | AT2G20050 (4.90E-29) | | PH01000025G1080 | DA1 | AT1G19270 (3.00E-155) | | PH01000028G2550 | Major facilitator superfamily protein | AT5G64500 (8.00E-159) | | PH01000067G1530 | HEAT repeat ;HECT-domain (ubiquitin-transferase) | AT4G38600 (0) | | PH01000225G1450 | yeast YAK1-related gene 1 | AT5G35980 (3.00E-163) | | PH01000264G0600 | - | - (-) | | PH01000299G0470 | Ribosomal protein L1p/L10e family | AT1G08360 (1.20E-95) | | PH01000682G0550 | heat shock factor binding protein | AT4G15802 (1.70E-12) | | PH01002135G0360 | SU(VAR)3-9 homolog 6 | AT2G22740 (2.50E-77) | | PH01002412G0120 | Zinc-binding ribosomal protein family protein | AT4G14320 (5.50E-45) | | PH01002493G0250 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | AT1G79570 (4.00E-136) | | PH01002528G0300 | RING/U-box superfamily protein | AT5G01960 (7.10E-66) | | PH01076040G0010 | RPM1 interacting protein 2 | AT4G25230 (3.50E-31) | | PH01164324G0010 | bZIP transcription factor family protein | AT5G06950 (5.60E-73) | | PH01173539G0010 | cyclic nucleotide gated channel 1 | AT5G53130 (2.70E-80) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000745 | GMP synthase (glutamine-hydrolyzing) activity,
pyrophosphatase_activity
CMGC_GSK (from iTAK)
protein-arginine_deiminase_activity
| details | | CFinderM000964 | intracellular,
putrescine biosynthetic process,
translation,
large ribosomal subunit,
protein-arginine_deiminase_activity
structural constituent of ribosome,
3'-5' exonuclease activity,
nucleobase-containing compound metabolic process,
cellular metabolic process,
| details | | CFinderM001095 | protein binding,
RLK-Pelle_LRR-VI-2 (from iTAK)
Spliceosome
RNA processing,
| details | | CFinderM001109 | RLK-Pelle_LRR-VI-2 (from iTAK)
regulation of Rab GTPase activity,
Spliceosome
| details | | CFinderM001305 | SNF2 Transcription_Regulator(from iTAK)
5'-3' exoribonuclease activity,
nucleic acid binding,
intracellular,
large ribosomal subunit,
nucleobase-containing compound metabolic process,
exonuclease activity,
| details | | CFinderM001383 | Metabolism_of_xenobiotics_by_cytochrome_P450
Drug_metabolism_-_cytochrome_P450
Glutathione_metabolism
protein transport,
small GTPase mediated signal transduction,
| details | | CFinderM001384 | protein transport,
| details | | CFinderM001478 | GH47 Glycoside_Hydrolases
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
deaminase activity,
AMP deaminase activity,
potassium_ion_transmembrane_transport
membrane,
potassium ion transmembrane transporter activity,
| details | | CFinderM001621 | AGC_NDR (from iTAK)
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
ubiquitin ligase complex,
G-protein coupled receptor signaling pathway,
AMP deaminase activity,
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
deaminase activity,
Spliceosome
| details | | CFinderM001668 | poly(A)+ mRNA export from nucleus,
SET Transcription_Regulator(from iTAK)
histone_lysine_methylation
large ribosomal subunit,
nuclear pore,
| details | | CFinderM001808 | protein binding,
Peroxisome
RNA_degradation
Endocytosis
| details | | CFinderM001814 | Spliceosome
nucleotide binding,
snRNA_binding
nuclear mRNA splicing, via spliceosome,
phospholipid transport,
phospholipid-translocating ATPase activity,
cation transport,
| details |
4.Expression profilings |
