CFinderM000833's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
7-methylguanosine mRNA capping,0.003936392GO:0006370
mRNA processing,0.006552047GO:0006397
mRNA guanylyltransferase activity,0.009988646GO:0004484
Ubiquitin_mediated_proteolysis0.044072282KEGG
mRNA_surveillance_pathway0.044072282KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000118G0790-AT4G31880 (4.00E-82)
PH01000315G0480mRNA capping enzyme family proteinAT3G09100 (7.00E-177)
PH01000383G0570plant VAP homolog 12AT2G45140 (8.60E-74)
PH01000496G0400homolog of yeast ergosterol28AT1G10030 (1.50E-50)
PH01000719G0620global transcription factor group E4AT1G06230 (2.30E-81)
PH01001567G0120ubiquitin-conjugating enzyme 36AT1G16890 (3.50E-83)
PH01003742G0070-AT3G01130 (2.20E-09)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000834Ubiquitin_mediated_proteolysis
details
CFinderM001018mitochondrial intermembrane space,
CMGC_CK2 (from iTAK)
mitochondrial electron transport, ubiquinol to cytochrome c,
copper ion transport,
ubiquinol-cytochrome-c reductase activity,
copper chaperone activity,
RNA-dependent DNA replication,
Oxidative_phosphorylation
Ribosome_biogenesis_in_eukaryotes
details
CFinderM001600C3H Transcription_Regulator(from PlantTFDB)
ubiquitin-dependent protein catabolic process,
details
CFinderM001648actin cytoskeleton,
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
actin_filament_depolymerization
ATP synthesis coupled proton transport,
mRNA_surveillance_pathway
hydrogen ion transmembrane transporter activity,
actin binding,
details
CFinderM001671Phagosome
proton-transporting V-type ATPase, V1 domain,
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o),
ion_transmembrane_transport
hydrogen ion transmembrane transporter activity,
proton-transporting ATPase activity, rotational mechanism,
details

4.Expression profilings