|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | ATP-dependent helicase activity, | 0.002945282 | GO:0008026 | | helicase activity, | 0.002945282 | GO:0004386 | | membrane coat, | 0.006359973 | GO:0030117 | | Ribosome_biogenesis_in_eukaryotes | 0.016946651 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000062G1430 | tetratricopeptide repeat (TPR)-containing protein | AT3G52140 (3.00E-132) | | PH01000432G0630 | Galactose oxidase/kelch repeat superfamily protein | AT5G50310 (0.00E+00) | | PH01001133G0580 | ILITYHIA | AT1G64790 (0.00E+00) | | PH01001463G0050 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT4G34910 (4.00E-123) | | PH01001587G0100 | transducin family protein / WD-40 repeat family protein | AT5G11240 (6.00E-140) | | PH01003790G0130 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT3G18600 (1.00E-148) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000433 | Ribosome_biogenesis_in_eukaryotes
ATP-dependent helicase activity,
threonine-tRNA ligase activity,
helicase activity,
| details | | CFinderM001069 | RNA modification,
pseudouridine synthesis,
nucleosome assembly,
| details | | CFinderM001364 | DNA replication factor C complex,
pyrimidine nucleotide biosynthetic process,
DNA clamp loader activity,
DNA_replication
CTP synthase activity,
Nucleotide_excision_repair
Mismatch_repair
DNA_replication
Base_excision_repair
| details | | CFinderM001770 | signal recognition particle,
Protein_export
membrane coat,
SRP-dependent cotranslational protein targeting to membrane,
7S RNA binding,
| details |
4.Expression profilings |
