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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | glucose-6-phosphate dehydrogenase activity, | 0.001048033 | GO:0004345 | | glucose metabolic process, | 0.002443393 | GO:0006006 | | galactosyltransferase activity, | 0.009303538 | GO:0008378 | | NADP binding, | 0.009303538 | GO:0050661 | | Glutathione_metabolism | 0.009887775 | KEGG | | Pentose_phosphate_pathway | 0.009887775 | KEGG | | Glycine,_serine_and_threonine_metabolism | 0.009887775 | KEGG | | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | 0.009887775 | KEGG | | Glycosaminoglycan_biosynthesis_-_chondroitin_sulfate_/_dermatan_sulfate | 0.019755788 | KEGG | | Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin | 0.019755788 | KEGG | | protein glycosylation, | 0.020002346 | GO:0006486 | | phosphoserine phosphatase activity, | 0.030554042 | GO:0004647 | | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, | 0.030554042 | GO:0016811 | | chorismate mutase activity, | 0.031819172 | GO:0004106 | | chorismate metabolic process, | 0.047839814 | GO:0046417 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000177 | microtubule_severing
katanin_complex
microtubule-based movement,
microtubule associated complex,
microtubule binding,
| details | | CFinderM000236 | NAK (from iTAK)
STAT Transcription_Regulator(from PlantTFDB)
Glycine,_serine_and_threonine_metabolism
magnesium_ion_transport
TKL-Pl-5 (from iTAK)
magnesium_ion_transmembrane_transporter_activity
| details | | CFinderM000542 | Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin
Glycosaminoglycan_biosynthesis_-_chondroitin_sulfate_/_dermatan_sulfate
protein glycosylation,
GARP-G2-like Transcription_Regulator(from iTAK)
G2-like Transcription_Regulator(from PlantTFDB)
| details | | CFinderM000721 | phospholipid transport,
phospholipid-translocating ATPase activity,
Glycine,_serine_and_threonine_metabolism
cation transport,
cation-transporting_ATPase_activity
magnesium ion binding,
phosphoserine phosphatase activity,
CAMK_CDPK (from iTAK)
integral to membrane,
L-serine biosynthetic process,
metal ion binding,
Methane_metabolism
| details | | CFinderM000804 | cysteine synthase activity,
chorismate mutase activity,
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
SET Transcription_Regulator(from iTAK)
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
chorismate metabolic process,
SNARE_interactions_in_vesicular_transport
Sulfur_metabolism
Cysteine_and_methionine_metabolism
| details | | CFinderM001036 | GT10 GlycosylTransferases
Various_types_of_N-glycan_biosynthesis
Fructose_and_mannose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
protein glycosylation,
Protein_processing_in_endoplasmic_reticulum
Butirosin_and_neomycin_biosynthesis
Streptomycin_biosynthesis
calcium ion transport,
hexokinase activity,
calcium:proton_antiporter_activity
UDP-glucose:glycoprotein_glucosyltransferase_activity
fucosyltransferase_activity
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
| details | | CFinderM001042 | CK1_CK1 (from iTAK)
protein transport,
Citrate_cycle_(TCA_cycle)
Carbon_fixation_pathways_in_prokaryotes
Endocytosis
| details | | CFinderM001078 | actin cytoskeleton,
actin_filament_depolymerization
actin binding,
intracellular,
| details | | CFinderM001584 | | details | | CFinderM001794 | NAK (from iTAK)
vacuolar_proton-transporting_V-type_ATPase,_V0_domain
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
Phagosome
Oxidative_phosphorylation
hydrogen ion transmembrane transporter activity,
calcium ion transport,
myosin complex,
calcium:proton_antiporter_activity
motor activity,
cation transmembrane transporter activity,
| details |
4.Expression profilings |
