Function module details

CFinderM000949's details annotation

Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
rRNA processing,	7.98E-05	GO:0006364
RNA methylation,	0.005151739	GO:0001510
methylation,	0.005151739	GO:0032259
small-subunit processome,	0.006745676	GO:0032040
methyltransferase activity,	0.03091586	GO:0008168

2.Module member annotation

Gene ID	Annotation	Arabidopsis ortholog (Blast e-value)
PH01000146G0880	-	AT1G19010 (4.70E-15)
PH01000242G0340	FtsJ-like methyltransferase family protein	AT4G25730 (0.00E+00)
PH01001194G0040	-	AT3G49990 (5.20E-73)
PH01003023G0320	U3 ribonucleoprotein (Utp) family protein	AT4G02400 (4.00E-173)
PH01005033G0050	splicing factor-related	AT5G06160 (6.00E-180)
PH01006260G0050	-	- (-)

3.Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderM000410	Ribosome_biogenesis_in_eukaryotes IWS1 Transcription_Regulator(from iTAK) tyrosine biosynthetic process, ribosomal_large_subunit_biogenesis ribosomal_large_subunit_export_from_nucleus small-subunit processome, cytoplasm,	details
CFinderM000940	nucleic acid binding, Ribosome_biogenesis_in_eukaryotes	details
CFinderM001079	SOS_response DNA metabolic process, cellular protein metabolic process,	details

4.Expression profilings