1.Module annotation (GSEA enrichment result) Function Annotation | FDR | Gene Ontolog | RLK-Pelle_PERK-2 (from iTAK) | 7.30E-05 | GFam | ethylene mediated signaling pathway, | 0.000223187 | GO:0009873 | endoplasmic reticulum membrane, | 0.00043996 | GO:0005789 | Plant_hormone_signal_transduction | 0.000779822 | KEGG | protein histidine kinase activity, | 0.000794395 | GO:0004673 | Others Transcription_Regulator(from iTAK) | 0.007244686 | GFam | two-component sensor activity, | 0.008523914 | GO:0000155 | protein tyrosine kinase activity, | 0.01158383 | GO:0004713 | two-component signal transduction system (phosphorelay), | 0.012410269 | GO:0000160 | EIL Transcription_Regulator(from PlantTFDB) | 0.014599106 | GFam | two-component response regulator activity, | 0.01463736 | GO:0000156 | signal transducer activity, | 0.017078098 | GO:0004871 | sulfate assimilation, | 0.046291133 | GO:0000103 |
2.Module member annotation
3.Direct connection functional modules Module ID | Function Annotation | Overlap condition | CFinderM000066 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, Linoleic_acid_metabolism iron ion binding, metal ion binding, oxidation-reduction process, MYB Transcription_Regulator(from PlantTFDB)
| details | CFinderM000320 | nicotinate phosphoribosyltransferase activity, nicotinate-nucleotide diphosphorylase (carboxylating) activity, adenylylsulfate_kinase_activity nicotinate nucleotide salvage, omega_peptidase_activity SNARE_interactions_in_vesicular_transport Nicotinate_and_nicotinamide_metabolism Nitrogen_metabolism sulfate assimilation, NAD biosynthetic process, nucleoside-triphosphatase activity, metal ion transmembrane transporter activity, ER to Golgi vesicle-mediated transport, magnesium_ion_transport transmembrane transport, cis-Golgi network, Golgi membrane,
| details | CFinderM000394 | Endocytosis Alanine,_aspartate_and_glutamate_metabolism IMP biosynthetic process, purine ribonucleotide biosynthetic process, phosphatidylcholine metabolic process, RLK-Pelle_RLCK-VI (from iTAK) Ether_lipid_metabolism
| details | CFinderM000588 | lipid catabolic process, MYB Transcription_Regulator(from PlantTFDB)
| details | CFinderM000688 | GT64 GlycosylTransferases Alanine,_aspartate_and_glutamate_metabolism intrinsic to endoplasmic reticulum membrane, Nicotinate_and_nicotinamide_metabolism Terpenoid_backbone_biosynthesis regulation of ARF GTPase activity, isoprenoid biosynthetic process,
| details | CFinderM000985 | nuclear mRNA splicing, via spliceosome, RLK-Pelle_RLCK-XII-1 (from iTAK) spliceosomal complex, cis-Golgi network, Golgi membrane, lysine biosynthetic process via diaminopimelate, ER to Golgi vesicle-mediated transport, dihydrodipicolinate synthase activity, snRNA_binding SNARE_interactions_in_vesicular_transport Lysine_biosynthesis protein binding, lyase activity,
| details | CFinderM001043 | lipoxygenase activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, Linoleic_acid_metabolism iron ion binding, metal ion binding, MYB Transcription_Regulator(from PlantTFDB)
| details | CFinderM001053 | endoplasmic reticulum membrane, ethylene mediated signaling pathway, Others Transcription_Regulator(from iTAK) protein histidine kinase activity, Plant_hormone_signal_transduction two-component sensor activity, signal transducer activity, two-component response regulator activity,
| details | CFinderM001304 | nucleoside-triphosphatase activity, ATPase activity, coupled to transmembrane movement of substances, GT47 GlycosylTransferases RLK-Pelle_CR4L (from iTAK) ABC_transporters ATPase activity, ATP binding, nucleotide binding, SNF2 Transcription_Regulator(from iTAK)
| details | CFinderM001432 | RLK-Pelle_CR4L (from iTAK) ubiquitin ligase complex, Ubiquitin_mediated_proteolysis regulation of ARF GTPase activity,
| details | CFinderM001436 | STE_STE20-Fray (from iTAK) CAMTA Transcription_Regulator(from PlantTFDB) Ubiquitin_mediated_proteolysis
| details | CFinderM001457 | mRNA_surveillance_pathway Diterpenoid_biosynthesis CAMTA Transcription_Regulator(from PlantTFDB) protein binding, mechanically-gated_ion_channel_activity
| details | CFinderM001458 | mRNA_surveillance_pathway AGC_RSK-2 (from iTAK) SBP Transcription_Regulator(from PlantTFDB) cell death,
| details | CFinderM001513 | Glycine,_serine_and_threonine_metabolism GH17 Glycoside_Hydrolases L-serine biosynthetic process, phosphoglycerate dehydrogenase activity, Methane_metabolism cofactor binding,
| details | CFinderM001826 | regulation of ARF GTPase activity,
| details |
4.Expression profilings |