CFinderM001011's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
LSD Transcription_Regulator(from PlantTFDB)0.001968258GFam
C2C2-LSD Transcription_Regulator(from iTAK)0.001968258GFam
protein folding,0.036929715GO:0006457
peptidyl-prolyl cis-trans isomerase activity,0.042691568GO:0003755
hydrolase_activity,_acting_on_acid_anhydrides0.042691568GO:0016817

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000037G1240-- (-)
PH01000301G0600-- (-)
PH01000944G0010ATP-dependent RNA helicase, mitochondrial, putativeAT5G39840 (0.00E+00)
PH01000971G0250HSP20-like chaperones superfamily proteinAT5G20970 (1.10E-18)
PH01001273G0090Cyclophilin-like peptidyl-prolyl cis-trans isomerase family proteinAT3G66654 (1.90E-28)
PH01001389G0360-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000336C2C2-LSD Transcription_Regulator(from iTAK)
LSD Transcription_Regulator(from PlantTFDB)
cellulose biosynthetic process,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM000608cell cycle arrest,
cyclin-dependent protein kinase inhibitor activity,
hydrolase_activity,_acting_on_acid_anhydrides
details
CFinderM000707CAMK_CDPK (from iTAK)
details
CFinderM001117LSD Transcription_Regulator(from PlantTFDB)
C2C2-LSD Transcription_Regulator(from iTAK)
details
CFinderM001292LSD Transcription_Regulator(from PlantTFDB)
C2C2-LSD Transcription_Regulator(from iTAK)
CAMK_CDPK (from iTAK)
vesicle docking involved in exocytosis,
endoplasmic reticulum,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001293CAMK_CDPK (from iTAK)
vesicle docking involved in exocytosis,
Protein_processing_in_endoplasmic_reticulum
details

4.Expression profilings