CFinderM001229's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis0.012838333KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000061G0730Transmembrane amino acid transporter family proteinAT1G80510 (4.00E-152)
PH01000083G13006-phosphogluconate dehydrogenase family proteinAT3G02360 (0.00E+00)
PH01000093G1390Zinc finger C-x8-C-x5-C-x3-H type family proteinAT3G21810 (1.70E-40)
PH01000101G1130-AT5G16610 (1.70E-82)
PH01000171G0080DYNAMIN-like 1EAT3G60190 (0.00E+00)
PH01000185G1170galacturonosyltransferase 13AT3G01040 (0.00E+00)
PH01000255G0380S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT3G56120 (1.00E-124)
PH01000332G03203-dehydroquinate synthase, putativeAT5G66120 (1.00E-164)
PH01000401G0680-AT1G53200 (1.60E-26)
PH01000467G0350MUTL protein homolog 1AT3G24320 (0.00E+00)
PH01000679G0170galacturonosyltransferase 10AT2G20810 (0.00E+00)
PH01001530G0240-AT4G38440 (0.00E+00)
PH01001679G0090LORELEI-LIKE-GPI-ANCHORED PROTEIN 1AT5G56170 (3.20E-44)
PH01001902G0120cyclophilin71AT3G44600 (0.00E+00)
PH01002063G0260DNA bindingAT3G52170 (7.90E-21)
PH01002523G0030glucose-6-phosphate/phosphate translocator 2AT1G61800 (1.00E-151)
PH01002852G0090embryo defective 2423AT3G48470 (8.30E-64)
PH01003811G0160SWIM zinc finger family proteinAT1G60560 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000658NAC Transcription_Regulator(from PlantTFDB)
heme oxidation,
heme oxygenase (decyclizing) activity,
hydrogen-translocating pyrophosphatase activity,
proton transport,
details
CFinderM000670NAC Transcription_Regulator(from PlantTFDB)
RLK-Pelle_LRR-III (from iTAK)
details
CFinderM001080nucleocytoplasmic transport,
small GTPase mediated signal transduction,
GTP_catabolic_process
protein transport,
GTPase activity,
signal transduction,
GTP binding,
intracellular protein transport,
intracellular,
membrane,
details
CFinderM001408outer membrane,
peptide-methionine-(S)-S-oxide reductase activity,
details
CFinderM001625SNF2 Transcription_Regulator(from iTAK)
cellular_homeostasis
mitochondrial outer membrane,
RNA methylation,
Homologous_recombination
details
CFinderM001638tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
NAC Transcription_Regulator(from PlantTFDB)
details
CFinderM001799Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings


Show details about module gene expression profiling