1.Module annotation (GSEA enrichment result) Function Annotation | FDR | Gene Ontolog | DNA repair, | 0.01971694 | GO:0006281 |
2.Module member annotation Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | PH01000548G0090 | DNA/RNA-binding protein Kin17, conserved region | AT1G55460 (8.00E-130) | PH01000680G0690 | RmlC-like cupins superfamily protein | AT2G28680 (3.00E-123) | PH01002051G0230 | histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) | AT1G77300 (1.00E-125) | PH01003857G0160 | - | - (-) | PH01004615G0050 | HhH-GPD base excision DNA repair family protein | AT5G04560 (9.60E-43) | PH01005440G0060 | - | - (-) |
3.Direct connection functional modules Module ID | Function Annotation | Overlap condition | CFinderM000195 | pyridoxine biosynthetic process, S-adenosylmethionine_biosynthetic_process proteolysis, pyridoxamine-phosphate oxidase activity, oxidoreductase activity, acting on the CH-NH2 group of donors, methionine adenosyltransferase activity, Endocytosis aminopeptidase activity,
| details | CFinderM000431 | Porphyrin_and_chlorophyll_metabolism C2C2-Dof Transcription_Regulator(from iTAK) HB-BELL Transcription_Regulator(from iTAK) TRAF Transcription_Regulator(from iTAK) Dof Transcription_Regulator(from PlantTFDB) TALE Transcription_Regulator(from PlantTFDB) oxygen-dependent protoporphyrinogen oxidase activity,
| details | CFinderM000761 | tRNA aminoacylation for protein translation,
| details | CFinderM000864 | mitochondrial inner membrane presequence translocase complex, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, Endocytosis
| details | CFinderM000934 | protein import into nucleus, nucleobase-containing compound metabolic process, bZIP Transcription_Regulator(from PlantTFDB) RNA binding,
| details | CFinderM000935 | tRNA aminoacylation for protein translation, Spliceosome
| details | CFinderM000937 | | details | CFinderM001347 | ubiquitin-dependent protein catabolic process,
| details |
4.Expression profilings |