CFinderM001239's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
DNA repair,0.01971694GO:0006281

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000548G0090DNA/RNA-binding protein Kin17, conserved regionAT1G55460 (8.00E-130)
PH01000680G0690RmlC-like cupins superfamily proteinAT2G28680 (3.00E-123)
PH01002051G0230histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)AT1G77300 (1.00E-125)
PH01003857G0160-- (-)
PH01004615G0050HhH-GPD base excision DNA repair family proteinAT5G04560 (9.60E-43)
PH01005440G0060-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000195pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
proteolysis,
pyridoxamine-phosphate oxidase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
methionine adenosyltransferase activity,
Endocytosis
aminopeptidase activity,
details
CFinderM000431Porphyrin_and_chlorophyll_metabolism
C2C2-Dof Transcription_Regulator(from iTAK)
HB-BELL Transcription_Regulator(from iTAK)
TRAF Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
oxygen-dependent protoporphyrinogen oxidase activity,
details
CFinderM000761tRNA aminoacylation for protein translation,
details
CFinderM000864mitochondrial inner membrane presequence translocase complex,
P-P-bond-hydrolysis-driven protein transmembrane transporter activity,
Endocytosis
details
CFinderM000934protein import into nucleus,
nucleobase-containing compound metabolic process,
bZIP Transcription_Regulator(from PlantTFDB)
RNA binding,
details
CFinderM000935tRNA aminoacylation for protein translation,
Spliceosome
details
CFinderM000937details
CFinderM001347ubiquitin-dependent protein catabolic process,
details

4.Expression profilings