1.Module annotation (GSEA enrichment result) Function Annotation | FDR | Gene Ontolog | checkpoint_clamp_complex | 0.000749988 | GO:0030896 | CK1_CK1-Pl (from iTAK) | 0.001686814 | GFam | Nicotinate_and_nicotinamide_metabolism | 0.003558271 | KEGG | cell_cycle_checkpoint | 0.006420771 | GO:0000075 | DNA_damage_checkpoint | 0.006420771 | GO:0000077 | NAD+ synthase (glutamine-hydrolyzing) activity, | 0.006422276 | GO:0003952 | NAD biosynthetic process, | 0.007844543 | GO:0009435 |
2.Module member annotation Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | PH01000031G0750 | carbon-nitrogen hydrolase family protein | AT1G55090 (4.20E-35) | PH01000031G0760 | carbon-nitrogen hydrolase family protein | AT1G55090 (2.00E-110) | PH01001103G0290 | Protein kinase family protein | AT3G03940 (0.00E+00) | PH01001551G0090 | RNI-like superfamily protein | AT3G07550 (1.00E-73) | PH01003093G0180 | pantothenate kinase 2 | AT4G32180 (2.00E-61) | PH01008675G0010 | cell cycle checkpoint control protein family | AT3G05480 (1.80E-74) |
3.Direct connection functional modules Module ID | Function Annotation | Overlap condition | CFinderM000347 | Pantothenate_and_CoA_biosynthesis Valine,_leucine_and_isoleucine_degradation CMGC_CDK-CRK7-CDK9 (from iTAK) pantothenate kinase activity, coenzyme A biosynthetic process, Propanoate_metabolism beta-Alanine_metabolism
| details | CFinderM001070 | GTnc GlycosylTransferases checkpoint_clamp_complex cell_cycle_checkpoint DNA_damage_checkpoint cullin-RING ubiquitin ligase complex,
| details |
4.Expression profilings |