|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | proteasome complex, | 0.00206134 | GO:0000502 | | regulation of protein catabolic process, | 0.006184019 | GO:0042176 | | enzyme regulator activity, | 0.025671044 | GO:0030234 | | Proteasome | 0.030405325 | KEGG | | RNA_degradation | 0.030405325 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000036G0470 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT5G57280 (2.00E-111) | | PH01000084G0760 | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | AT2G32730 (0.00E+00) | | PH01000130G0110 | FRAGILE HISTIDINE TRIAD | AT5G58240 (4.20E-45) | | PH01001679G0360 | Transducin/WD40 repeat-like superfamily protein | AT3G13300 (0.00E+00) | | PH01002279G0010 | Haem oxygenase-like, multi-helical | AT5G32470 (9.00E-171) | | PH01008016G0020 | - | - (-) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000535 | GT37 GlycosylTransferases
CMGC_MAPK (from iTAK)
| details | | CFinderM000650 | proteasome complex,
Golgi_transport_complex
regulation of protein catabolic process,
cell death,
binding,
enzyme regulator activity,
RNA metabolic process,
| details | | CFinderM001081 | proteasome complex,
regulation of protein catabolic process,
enzyme regulator activity,
Rcd1-like Transcription_Regulator(from iTAK)
Proteasome
binding,
transcription factor TFIID complex,
glycyl-tRNA aminoacylation,
RLK-Pelle_LRR-XII-1 (from iTAK)
glycine-tRNA ligase activity,
| details | | CFinderM001370 | proteasome complex,
regulation of protein catabolic process,
enzyme regulator activity,
Proteasome
binding,
small protein activating enzyme activity,
RNA metabolic process,
cellular protein modification process,
| details |
4.Expression profilings |
