CFinderM001341's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_LRR-II (from iTAK)0.011796633GFam
RLK-Pelle_RLCK-VIIa-2 (from iTAK)0.017079744GFam
microtubule associated complex,0.018055548GO:0005875
protein phosphorylation,0.042491047GO:0006468
microtubule-based movement,0.042491047GO:0007018

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000049G1510-- (-)
PH01000121G1170ATP binding microtubule motor family proteinAT3G16060 (0.00E+00)
PH01000303G0350somatic embryogenesis receptor-like kinase 2AT1G34210 (0)
PH01000501G0350Protein of unknown function (DUF962)AT1G18720 (1.80E-34)
PH01000603G0710-AT1G50660 (1.00E-113)
PH01000724G0040Protein kinase superfamily proteinAT2G17220 (4.00E-132)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000536SET Transcription_Regulator(from iTAK)
Others Transcription_Regulator(from iTAK)
details
CFinderM000574Others Transcription_Regulator(from iTAK)
signal transduction,
details
CFinderM000647RLK-Pelle_RLCK-VIIa-2 (from iTAK)
details
CFinderM000861Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
Pantothenate_and_CoA_biosynthesis
branched chain family amino acid metabolic process,
AGC_RSK-2 (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
iron-sulfur cluster assembly,
branched-chain-amino-acid transaminase activity,
details
CFinderM000887SWI/SNF-BAF60b Transcription_Regulator(from iTAK)
histone modification,
transcription initiation, DNA-dependent,
details
CFinderM000918GT48 GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
TKL-Pl-4 (from iTAK)
microtubule cytoskeleton organization,
(1->3)-beta-D-glucan biosynthetic process,
cytokinesis
1,3-beta-D-glucan synthase complex,
mRNA_surveillance_pathway
details
CFinderM001399RNA_transport
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
Base_excision_repair
details
CFinderM001537vacuolar proton-transporting V-type ATPase, V1 domain,
ATP hydrolysis coupled proton transport,
MYB_related Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001752spindle pole,
microtubule organizing center,
STE_STE11 (from iTAK)
microtubule cytoskeleton organization,
mRNA_surveillance_pathway
details
CFinderM001880RNA_transport
C2H2 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
details

4.Expression profilings