CFinderM001380's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Valine,_leucine_and_isoleucine_degradation0.007350344KEGG
RLK-Pelle_LRR-XIV (from iTAK)0.009620188GFam
Benzoate_degradation0.012856069KEGG
GRAS Transcription_Regulator(from PlantTFDB)0.027327418GFam
Fatty_acid_metabolism0.030008144KEGG
Biosynthesis_of_unsaturated_fatty_acids0.030008144KEGG
alpha-Linolenic_acid_metabolism0.030008144KEGG
Peroxisome0.046779531KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G2010CRT (chloroquine-resistance transporter)-like transporter 2AT4G24460 (4.40E-90)
PH01000360G0740RING/FYVE/PHD-type zinc finger family proteinAT3G43230 (3.00E-163)
PH01000382G0190SCARECROW-like 1AT1G21450 (6.00E-144)
PH01000589G0300Leucine-rich repeat protein kinase family proteinAT4G39270 (2.00E-114)
PH01000611G0090-AT2G25670 (2.80E-21)
PH01000892G0250-AT2G20562 (1.70E-09)
PH01001504G0170Transmembrane amino acid transporter family proteinAT3G30390 (2.00E-149)
PH01001580G0120peroxisomal 3-ketoacyl-CoA thiolase 3AT2G33150 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000404Valine,_leucine_and_isoleucine_degradation
Benzoate_degradation
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
Biosynthesis_of_unsaturated_fatty_acids
alpha-Linolenic_acid_metabolism
Fatty_acid_metabolism
Peroxisome
G2-like Transcription_Regulator(from PlantTFDB)
GARP-G2-like Transcription_Regulator(from iTAK)
details
CFinderM000530RLK-Pelle_LRR-XIV (from iTAK)
transmembrane transport,
GRAS Transcription_Regulator(from PlantTFDB)
details
CFinderM000531transmembrane transport,
Plant_hormone_signal_transduction
details
CFinderM000629RLK-Pelle_LRR-XIV (from iTAK)
AUX/IAA Transcription_Regulator(from iTAK)
transcription factor TFIID complex,
Drug_metabolism_-_cytochrome_P450
Metabolism_of_xenobiotics_by_cytochrome_P450
Basal_transcription_factors
details
CFinderM001128Galactose_metabolism
Porphyrin_and_chlorophyll_metabolism
details
CFinderM001143endoplasmic reticulum membrane,
protein N-linked glycosylation via asparagine,
Valine,_leucine_and_isoleucine_degradation
Benzoate_degradation
Various_types_of_N-glycan_biosynthesis
Biosynthesis_of_unsaturated_fatty_acids
alpha-Linolenic_acid_metabolism
Fatty_acid_metabolism
N-Glycan_biosynthesis
response to stress,
details
CFinderM001324Valine,_leucine_and_isoleucine_degradation
Benzoate_degradation
metabolic process,
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_metabolism
alpha-Linolenic_acid_metabolism
details
CFinderM001325galactose metabolic process,
UDP-glucose 4-epimerase activity,
cellular metabolic process,
RNA_degradation
Amino_sugar_and_nucleotide_sugar_metabolism
Galactose_metabolism
details
CFinderM001363GT20 GlycosylTransferases
mitochondrial inner membrane,
Porphyrin_and_chlorophyll_metabolism
Starch_and_sucrose_metabolism
details

4.Expression profilings