CFinderM001426's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein import into mitochondrial outer membrane,0.006420269GO:0045040
cell volume homeostasis,0.006420269GO:0006884
'de novo' IMP biosynthetic process,0.008556079GO:0006189
mitochondrial outer membrane translocase complex,0.010821358GO:0005742
chloride transport,0.015219576GO:0006821
phosphoribosylformylglycinamidine cyclo-ligase activity,0.015312148GO:0004641

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G0390glycine-rich RNA-binding protein 3AT5G61030 (1.60E-36)
PH01000040G1480phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)AT3G55010 (2.00E-138)
PH01000356G0330Ribosomal protein L14p/L23e family proteinAT3G04400 (3.40E-76)
PH01000509G1000P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT4G24710 (1.00E-86)
PH01000642G0600-AT1G76405 (2.00E-45)
PH01001760G0230Metal-dependent protein hydrolaseAT5G41970 (8.00E-158)
PH01002251G0030nucleotide-sensitive chloride conductance regulator (ICln) family proteinAT5G62290 (3.20E-47)
PH01003137G0160translocase outer membrane 20-2AT1G27390 (8.30E-51)
PH01006106G0030HIT zinc finger ;PAPA-1-like conserved regionAT2G47350 (3.00E-41)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000557Lipoic_acid_metabolism
lipoate biosynthetic process,
nucleus,
chloroplast,
lipoate synthase activity,
DNA_replication
4 iron, 4 sulfur cluster binding,
details
CFinderM000690protein methylation,
HMG Transcription_Regulator(from iTAK)
GRAS Transcription_Regulator(from PlantTFDB)
details
CFinderM001428nuclear mRNA splicing, via spliceosome,
spliceosomal complex,
cell volume homeostasis,
COPII_vesicle_coating
lysine biosynthetic process via diaminopimelate,
chloride transport,
dihydrodipicolinate synthase activity,
snRNA_binding
Lysine_biosynthesis
details
CFinderM001431details
CFinderM001462ATP-dependent peptidase activity,
cellular process,
Endocytosis
details

4.Expression profilings


Show details about module gene expression profiling