1.Module annotation (GSEA enrichment result) Function Annotation | FDR | Gene Ontolog | nucleobase-containing compound metabolic process, | 0.00989937 | GO:0006139 | eukaryotic translation initiation factor 3 complex, | 0.013478707 | GO:0005852 |
2.Module member annotation Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | PH01000010G2530 | ubiquitin-conjugating enzyme 5 | AT1G63800 (8.20E-68) | PH01000013G1500 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | AT4G21800 (6.00E-127) | PH01000211G0840 | mRNAadenosine methylase | AT4G10760 (4.00E-166) | PH01000223G0730 | Nucleotidyltransferase family protein | AT2G39740 (4.50E-68) | PH01001756G0320 | Proteasome component (PCI) domain protein | AT5G15610 (3.00E-120) | PH01002296G0240 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT1G05600 (2.60E-62) |
3.Direct connection functional modules Module ID | Function Annotation | Overlap condition | CFinderM000069 | Ribosome_biogenesis_in_eukaryotes Ino80_complex ATP-dependent_5'-3'_DNA_helicase_activity rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA methyltransferase activity, rRNA (adenine) methyltransferase activity, snoRNA binding, snRNA_pseudouridine_synthesis rRNA modification,
| details | CFinderM000341 | exosome_(RNase_complex) COP9_signalosome
| details | CFinderM000692 | CMGC_CLK (from iTAK) ornithine_metabolic_process histone deacetylation, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity, histone deacetylase activity, Arginine_and_proline_metabolism cellular amino acid metabolic process,
| details | CFinderM000693 | ornithine_metabolic_process histone deacetylation, protein import into nucleus, ornithine carbamoyltransferase activity, carboxyl- or carbamoyltransferase activity, histone deacetylase activity, Arginine_and_proline_metabolism cellular amino acid metabolic process, protein transporter activity, amino acid binding,
| details | CFinderM000765 | protein import into nucleus, nucleus, nucleobase-containing compound metabolic process, bZIP Transcription_Regulator(from PlantTFDB) Spliceosome
| details | CFinderM000934 | protein import into nucleus, nucleobase-containing compound metabolic process, bZIP Transcription_Regulator(from PlantTFDB) RNA binding,
| details |
4.Expression profilings |