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1.Module annotation (GSEA enrichment result)
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000170 | cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
ubiquitin-dependent protein catabolic process,
| details | | CFinderM000229 | GT2 GlycosylTransferases
NuA4_histone_acetyltransferase_complex
histone_H2A_acetylation
protein homooligomerization,
histone_H4_acetylation
chromatin remodeling,
negative_regulation_of_transcription,_DNA-templated
RNA modification,
pseudouridine synthesis,
| details | | CFinderM000256 | signal recognition particle,
proton-transporting two-sector ATPase complex, proton-transporting domain,
| details | | CFinderM000389 | protein folding,
response to heat,
unfolded protein binding,
| details | | CFinderM000453 | carbon fixation,
response to wounding,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
| details | | CFinderM000501 | oligosaccharide metabolic process,
mannosyl-oligosaccharide glucosidase activity,
Peroxisome
N-Glycan_biosynthesis
| details | | CFinderM000540 | condensin_complex
CK1_CK1 (from iTAK)
mitotic_chromosome_condensation
| details | | CFinderM000627 | DNA primase activity,
DNA_replication
| details | | CFinderM000733 | TBP-class_protein_binding
positive_regulation_of_transcription,_DNA-templated
WASH_complex
outer membrane,
transcription initiation, DNA-dependent,
zinc ion binding,
| details | | CFinderM000734 | WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
| details | | CFinderM000860 | protein targeting,
drug_binding
P-P-bond-hydrolysis-driven protein transmembrane transporter activity,
| details | | CFinderM000898 | WASH_complex
cullin-RING ubiquitin ligase complex,
PHD Transcription_Regulator(from iTAK)
mitotic_spindle_assembly_checkpoint
ubiquitin protein ligase binding,
cysteine-type peptidase activity,
protein serine/threonine phosphatase activity,
| details | | CFinderM001015 | DNA primase activity,
| details | | CFinderM001203 | SNARE_interactions_in_vesicular_transport
ubiquitin-dependent protein catabolic process,
| details | | CFinderM001242 | mitotic_spindle_assembly_checkpoint
WASH_complex
PHD Transcription_Regulator(from iTAK)
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
| details | | CFinderM001248 | DNA primase activity,
| details | | CFinderM001253 | CMGC_CLK (from iTAK)
membrane,
| details | | CFinderM001261 | thymidylate synthase activity,
dihydrofolate reductase activity,
dTMP biosynthetic process,
ribosome biogenesis,
nucleotidyltransferase activity,
| details | | CFinderM001360 | cysteine-type peptidase activity,
galactosyltransferase activity,
protein glycosylation,
| details | | CFinderM001402 | phosphatidylinositol-mediated signaling,
RNA 3'-end processing,
RNA polyadenylation,
phosphatidylinositol_biosynthetic_process
phosphatidylinositol phosphorylation,
1-phosphatidylinositol_4-kinase_activity
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
mRNA_surveillance_pathway
polynucleotide adenylyltransferase activity,
| details | | CFinderM001424 | WASH_complex
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
Peroxisome
| details | | CFinderM001595 | dephosphorylation,
Butanoate_metabolism
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
| details | | CFinderM001638 | tRNA methylation,
tRNA (guanine-N1-)-methyltransferase activity,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001789 | proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
C3H Transcription_Regulator(from PlantTFDB)
ATP hydrolysis coupled proton transport,
DNA repair,
nuclease activity,
endonuclease activity,
hydrogen ion transmembrane transporter activity,
| details | | CFinderM001799 | Various_types_of_N-glycan_biosynthesis
Base_excision_repair
N-Glycan_biosynthesis
nuclease activity,
endonuclease activity,
NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001830 | WASH_complex
drug_binding
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
| details |
4.Expression profilings |
