CFinderM001600's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
C3H Transcription_Regulator(from PlantTFDB)0.020142381GFam
ubiquitin-dependent protein catabolic process,0.025238006GO:0006511

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000227G0270OTU-like cysteine protease family proteinAT1G50670 (1.00E-100)
PH01000383G0570plant VAP homolog 12AT2G45140 (8.60E-74)
PH01000505G0680Ubiquitin C-terminal hydrolases superfamily proteinAT4G22285 (0.00E+00)
PH01001046G0110-- (-)
PH01001985G0040SAC3/GANP/Nin1/mts3/eIF-3 p25 familyAT3G06290 (4.00E-161)
PH01004858G0040SMAD/FHA domain-containing protein AT5G38840 (2.70E-67)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000382ribulose-phosphate 3-epimerase activity,
racemase and epimerase activity, acting on carbohydrates and derivatives,
endoplasmic reticulum,
pentose-phosphate shunt,
details
CFinderM0008337-methylguanosine mRNA capping,
mRNA processing,
mRNA guanylyltransferase activity,
Ubiquitin_mediated_proteolysis
mRNA_surveillance_pathway
details
CFinderM000834Ubiquitin_mediated_proteolysis
details

4.Expression profilings