CFinderM001646's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Tify Transcription_Regulator(from iTAK)0.003932211GFam
mRNA_catabolic_process0.005155766GO:0006402
polyribonucleotide_nucleotidyltransferase_activity0.010191008GO:0004654
3'-5'-exoribonuclease activity,0.010191008GO:0000175
RNA processing,0.03488706GO:0006396

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000180G0930Ribosomal protein S5/Elongation factor G/III/V family proteinAT1G06220 (0.00E+00)
PH01000743G0080polyribonucleotide nucleotidyltransferase, putativeAT5G14580 (0.00E+00)
PH01000781G0390HIT-type Zinc finger family proteinAT1G04945 (1.90E-34)
PH01002950G0020jasmonate-zim-domain protein 3AT3G17860 (5.90E-20)
PH01003832G0070Transducin/WD40 repeat-like superfamily proteinAT1G03110 (6.50E-53)
PH01005790G0030Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domainAT5G60980 (1.40E-79)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000940nucleic acid binding,
Ribosome_biogenesis_in_eukaryotes
details
CFinderM000950ER to Golgi vesicle-mediated transport,
Mismatch_repair
Golgi membrane,
cis-Golgi network,
SNARE_interactions_in_vesicular_transport
Mismatch_repair
details
CFinderM001282protein methylation,
intracellular,
methyltransferase activity,
nucleotide binding,
nucleic acid binding,
IWS1 Transcription_Regulator(from iTAK)
ribosome biogenesis,
transport,
details
CFinderM001283TKL-Pl-4 (from iTAK)
intracellular,
ribosome biogenesis,
details
CFinderM001427outer membrane,
RLK-Pelle_DLSV (from iTAK)
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001882Valine,_leucine_and_isoleucine_biosynthesis
C5-Branched_dibasic_acid_metabolism
branched chain family amino acid biosynthetic process,
SBP Transcription_Regulator(from PlantTFDB)
Butanoate_metabolism
Pantothenate_and_CoA_biosynthesis
acetolactate synthase activity,
details

4.Expression profilings