CFinderM001670's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
isoprenoid biosynthetic process,0.023554586GO:0008299

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000356G0410RNA-binding (RRM/RBD/RNP motifs) family proteinAT1G60000 (4.10E-65)
PH01000634G0170DNA-binding family proteinAT4G34430 (8.00E-156)
PH01001160G0560Pentatricopeptide repeat (PPR-like) superfamily proteinAT1G09900 (4.00E-166)
PH01001872G0010-- (-)
PH01002495G021031-kDa RNA binding proteinAT4G24770 (2.60E-58)
PH01002517G0290UDP-glucosyl transferase 72B3AT1G01420 (8.80E-94)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000510Porphyrin_and_chlorophyll_metabolism
protochlorophyllide reductase activity,
glutamate-1-semialdehyde 2,1-aminomutase activity,
tetrapyrrole biosynthetic process,
sodium ion transport,
RNA_degradation
details
CFinderM000559regulation of cell shape,
cell division,
Ino80_complex
Aminoacyl-tRNA_biosynthesis
carbon-nitrogen ligase activity, with glutamine as amido-N-donor,
ligase activity,
chromatin binding,
details
CFinderM000897Pentose_and_glucuronate_interconversions
Ascorbate_and_aldarate_metabolism
intramolecular lyase activity,
Amino_sugar_and_nucleotide_sugar_metabolism
details
CFinderM000914tetrapyrrole biosynthetic process,
glutamate-1-semialdehyde 2,1-aminomutase activity,
ubiquitin-dependent protein catabolic process,
details
CFinderM000982RNA_degradation
folic acid-containing compound biosynthetic process,
methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity
cullin-RING ubiquitin ligase complex,
details
CFinderM000994aminoacyl-tRNA_editing_activity
metallopeptidase activity,
details
CFinderM001041isoprenoid biosynthetic process,
details
CFinderM001449WNK_NRBP (from iTAK)
CAMK_CAMKL-CHK1 (from iTAK)
details

4.Expression profilings