|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | GT47 GlycosylTransferases | 0.002997141 | GFam | | dephosphorylation, | 0.025738575 | GO:0016311 | | Butanoate_metabolism | 0.037440852 | KEGG | | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, | 0.040811339 | GO:0016624 | | Pyruvate_metabolism | 0.041933802 | KEGG | | Citrate_cycle_(TCA_cycle) | 0.041933802 | KEGG | | Glycolysis_/_Gluconeogenesis | 0.043765654 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000002G2800 | Exostosin family protein | AT5G61840 (0) | | PH01000027G0920 | suppressor of abi3-5 | AT3G54230 (4.00E-180) | | PH01000092G1150 | pyruvate dehydrogenase complex E1 alpha subunit | AT1G59900 (1.00E-168) | | PH01000343G0840 | histone mono-ubiquitination 1 | AT2G44950 (2.10E-32) | | PH01000531G0200 | Insulinase (Peptidase family M16) protein | AT3G02090 (0.00E+00) | | PH01001902G0310 | Myotubularin-like phosphatases II superfamily | AT3G10550 (1.00E-84) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000837 | glutamyl-tRNA aminoacylation,
guanosine tetraphosphate metabolic process,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
Porphyrin_and_chlorophyll_metabolism
glutamate-tRNA ligase activity,
ligase activity, forming aminoacyl-tRNA and related compounds,
tRNA binding,
tRNA aminoacylation for protein translation,
| details | | CFinderM001401 | Plant_hormone_signal_transduction
bZIP Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001402 | phosphatidylinositol-mediated signaling,
RNA 3'-end processing,
RNA polyadenylation,
phosphatidylinositol_biosynthetic_process
phosphatidylinositol phosphorylation,
1-phosphatidylinositol_4-kinase_activity
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
mRNA_surveillance_pathway
polynucleotide adenylyltransferase activity,
| details | | CFinderM001595 | dephosphorylation,
Butanoate_metabolism
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
| details | | CFinderM001649 | CMGC_CDK-PITSLRE (from iTAK)
LUG Transcription_Regulator(from iTAK)
sphingolipid metabolic process,
glucosylceramidase activity,
| details | | CFinderM001650 | sphingolipid metabolic process,
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
glucosylceramidase activity,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
serine-type carboxypeptidase activity,
nucleotidyltransferase activity,
| details | | CFinderM001679 | PHD Transcription_Regulator(from iTAK)
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Butanoate_metabolism
nucleotidyltransferase activity,
serine-type carboxypeptidase activity,
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
| details | | CFinderM001766 | proton-transporting ATP synthase complex, catalytic core F(1),
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
mitochondrial outer membrane,
ATP metabolic process,
anion transport,
ATP biosynthetic process,
ATP_catabolic_process
regulation_of_anion_transport
proton transport,
ATP synthesis coupled proton transport,
fructose-bisphosphate aldolase activity,
voltage-gated anion channel activity,
ATP hydrolysis coupled proton transport,
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
| details | | CFinderM001800 | proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
ATP synthesis coupled proton transport,
ATP hydrolysis coupled proton transport,
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
ATP biosynthetic process,
ATP metabolic process,
ATP_catabolic_process
proton transport,
nucleoside-triphosphatase activity,
double-stranded RNA binding,
| details | | CFinderM001830 | WASH_complex
drug_binding
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
| details |
4.Expression profilings |
