CFinderM001829's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
retrograde transport, endosome to Golgi,0.004687793GO:0042147
proton transport,0.018720426GO:0015992
hydrogen-translocating pyrophosphatase activity,0.02458028GO:0009678
inorganic diphosphatase activity,0.02458028GO:0004427
Ether_lipid_metabolism0.029847416KEGG
WRKY Transcription_Regulator(from PlantTFDB)0.032616523GFam
Glycerophospholipid_metabolism0.035907539KEGG
Oxidative_phosphorylation0.043912148KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000287G0350-AT2G17695 (6.70E-58)
PH01000557G0340WRKY DNA-binding protein 11AT4G31550 (1.70E-34)
PH01000992G0340sacI homology domain-containing protein / WW domain-containing proteinAT3G59770 (6.10E-98)
PH01001039G0450-- (-)
PH01001508G0150VPS54AT4G19490 (3.00E-149)
PH01002007G0050Inorganic H pyrophosphatase family proteinAT1G16780 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000188ubiquitin-dependent protein catabolic process,
details
CFinderM001342details
CFinderM001377C2H2 Transcription_Regulator(from PlantTFDB)
details
CFinderM001418membrane,
proton transport,
Ether_lipid_metabolism
inorganic diphosphatase activity,
hydrogen-translocating pyrophosphatase activity,
Glycerophospholipid_metabolism
Oxidative_phosphorylation
details
CFinderM001512leucyl-tRNA aminoacylation,
GT8 GlycosylTransferases
leucine-tRNA ligase activity,
aminoacyl-tRNA_editing_activity
tRNA aminoacylation for protein translation,
Starch_and_sucrose_metabolism
Amino_sugar_and_nucleotide_sugar_metabolism
Aminoacyl-tRNA_biosynthesis
details
CFinderM001651clathrin adaptor complex,
COPI vesicle coat,
retrograde vesicle-mediated transport, Golgi to ER,
inorganic diphosphatase activity,
hydrogen-translocating pyrophosphatase activity,
Ether_lipid_metabolism
proton transport,
Glycerophospholipid_metabolism
details
CFinderM001710membrane,
CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
hydrolase activity, acting on glycosyl bonds,
hydrogen-translocating pyrophosphatase activity,
transporter activity,
inorganic diphosphatase activity,
proton transport,
transport,
isoprenoid biosynthetic process,
Terpenoid_backbone_biosynthesis
Oxidative_phosphorylation
details
CFinderM001892phenylalanyl-tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
WRKY Transcription_Regulator(from PlantTFDB)
tRNA binding,
details
CFinderM001893Golgi-associated vesicle,
Terpenoid_backbone_biosynthesis
membrane coat,
COPI vesicle coat,
isoprenoid biosynthetic process,
details

4.Expression profilings