CFinderM001874's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Endocytosis0.018055548KEGG
Jumonji Transcription_Regulator(from iTAK)0.021627161GFam
bZIP Transcription_Regulator(from PlantTFDB)0.036824004GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000116G0150methyl esterase 14AT1G33990 (9.00E-126)
PH01000571G0710RNA-binding protein 47AAT1G49600 (4.00E-101)
PH01000826G0420SIGNAL PEPTIDE PEPTIDASE-LIKE 2AT1G63690 (2.00E-141)
PH01001104G0340Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family proteinAT1G30810 (0)
PH01001274G0310SNF7 family proteinAT5G04850 (4.60E-91)
PH01001527G0270-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000016protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
details
CFinderM000813Arp2/3_protein_complex
Arp2/3_complex-mediated_actin_nucleation
regulation of actin filament polymerization,
cytoskeleton,
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001156single-stranded DNA binding,
DNA_replication
details
CFinderM001522SNF2 Transcription_Regulator(from iTAK)
nucleolus,
nuclear pore,
RNA_transport
details

4.Expression profilings