CFinderM001879's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cis-Golgi network,0.012023355GO:0005801

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000037G1230CTC-interacting domain 9AT3G14450 (2.50E-96)
PH01000155G1180nucleic acid bindingAT1G27750 (3.90E-82)
PH01000190G0200SNARE-like superfamily proteinAT1G51160 (3.00E-68)
PH01000242G1240SPA (suppressor of phyA-105) protein familyAT2G46340 (1.00E-140)
PH01000668G0460histone mono-ubiquitination 1AT2G44950 (2.00E-171)
PH01001189G0100Telomerase activating protein Est1AT5G19400 (1.20E-97)
PH01001953G0280RAB GTPase homolog A1DAT4G18800 (7.20E-98)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001457mRNA_surveillance_pathway
Diterpenoid_biosynthesis
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
mechanically-gated_ion_channel_activity
details
CFinderM001468IWS1 Transcription_Regulator(from iTAK)
Biotin_metabolism
Fatty_acid_biosynthesis
details
CFinderM001525MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001546calcium-dependent cysteine-type endopeptidase activity,
mechanically-gated_ion_channel_activity
GH17 Glycoside_Hydrolases
CBM43 Carbohydrate-Binding_Modules
MYB-related Transcription_Regulator(from iTAK)
endoplasmic reticulum,
integral to membrane,
details
CFinderM001570cis-Golgi network,
transcription factor TFIID complex,
Basal_transcription_factors
details
CFinderM001574SBP Transcription_Regulator(from PlantTFDB)
mRNA_surveillance_pathway
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001729mRNA_surveillance_pathway
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
transferase activity, transferring acyl groups,
details
CFinderM001785transferase activity, transferring pentosyl groups,
Nicotinate_and_nicotinamide_metabolism
Diterpenoid_biosynthesis
details
CFinderM001786lipid metabolic process,
details
CFinderM001788protein folding,
protein catabolic process,
details
CFinderM001819SNF2 Transcription_Regulator(from iTAK)
cis-Golgi network,
mRNA_surveillance_pathway
details
CFinderM001820mediator complex,
CBM43 Carbohydrate-Binding_Modules
GH17 Glycoside_Hydrolases
details
CFinderM001837Ribosome
ribosome biogenesis,
ribonucleoprotein complex,
large ribosomal subunit,
details
CFinderM001849SNF2 Transcription_Regulator(from iTAK)
mediator complex,
regulation of transcription from RNA polymerase II promoter,
details

4.Expression profilings