CFinderM001894's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
AGC_NDR (from iTAK)0.00174918GFam
Golgi apparatus,0.004812049GO:0005794
membrane coat,0.013595842GO:0030117
clathrin adaptor complex,0.013595842GO:0030131
nucleic acid binding,0.024948406GO:0003676

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000036G0740Adaptor protein complex AP-1, gamma subunitAT1G60070 (0.00E+00)
PH01000110G0290AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family proteinAT2G20470 (5.00E-125)
PH01000132G0780F-box and associated interaction domains-containing proteinAT3G10240 (1.80E-09)
PH01000240G0240Ubiquitin-like superfamily proteinAT4G01000 (3.40E-29)
PH01001998G0070Single-stranded nucleic acid binding R3H proteinAT2G40960 (3.30E-57)
PH01002557G0220oligouridylate binding protein 1BAT1G17370 (2.00E-158)
PH01004743G0110DYNAMIN-like 1CAT1G14830 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000139metabolic process,
transferase activity, transferring hexosyl groups,
cysteine metabolic process,
phenylalanyl-tRNA aminoacylation,
cysteine desulfurase activity,
phenylalanine-tRNA ligase activity,
details
CFinderM000875membrane,
cellulose biosynthetic process,
cellulose synthase (UDP-forming) activity,
acetylglucosaminyltransferase activity,
ubiquitin thiolesterase activity,
ubiquitin-dependent protein catabolic process,
details
CFinderM000876GTPase activity,
GTP binding,
cellulose biosynthetic process,
ubiquitin-dependent protein catabolic process,
cellulose synthase (UDP-forming) activity,
ubiquitin thiolesterase activity,
structural molecule activity,
details
CFinderM001049microtubule associated complex,
microtubule-based movement,
microtubule motor activity,
PcG_protein_complex
F-actin capping protein complex,
Sesquiterpenoid_and_triterpenoid_biosynthesis
spindle pole,
WASH_complex
microtubule organizing center,
DNA polymerase III complex,
RLK-Pelle_RLCK-V (from iTAK)
CK1_CK1 (from iTAK)
Pantothenate_and_CoA_biosynthesis
macromolecule biosynthetic process,
details
CFinderM001050SNARE_interactions_in_vesicular_transport
details
CFinderM001290Protein_processing_in_endoplasmic_reticulum
AGC_NDR (from iTAK)
details
CFinderM001443Fatty_acid_biosynthesis
3-oxoacyl-[acyl-carrier-protein] synthase activity,
translational termination,
mRNA_surveillance_pathway
translation release factor activity, codon specific,
lipid biosynthetic process,
details
CFinderM001476RLK-Pelle_RLCK-V (from iTAK)
spermine biosynthetic process,
spermidine biosynthetic process,
cytoskeleton,
Cysteine_and_methionine_metabolism
Arginine_and_proline_metabolism
microtubule associated complex,
adenosylmethionine decarboxylase activity,
details
CFinderM001626Golgi apparatus,
membrane coat,
clathrin adaptor complex,
Amino_sugar_and_nucleotide_sugar_metabolism
Starch_and_sucrose_metabolism
details
CFinderM001647phenylalanyl-tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
aminoacyl-tRNA ligase activity,
fumarate metabolic process,
nucleotide binding,
magnesium ion binding,
tricarboxylic acid cycle enzyme complex,
fumarate hydratase activity,
cytoplasm,
mitochondrial outer membrane,
RNA binding,
tricarboxylic acid cycle,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
lyase activity,
details
CFinderM001747NAK (from iTAK)
Sulfur_relay_system
Thiamine_metabolism
Golgi apparatus,
cysteine metabolic process,
membrane coat,
clathrin adaptor complex,
cysteine desulfurase activity,
regulation of ARF protein signal transduction,
cytoskeleton organization,
ARF guanyl-nucleotide exchange factor activity,
details
CFinderM001775myosin complex,
TBP-class_protein_binding
Fructose_and_mannose_metabolism
Basal_transcription_factors
Amino_sugar_and_nucleotide_sugar_metabolism
motor activity,
details
CFinderM001825GT66 GlycosylTransferases
cation:chloride_symporter_activity
oligosaccharyl transferase activity,
spindle pole,
microtubule organizing center,
microtubule cytoskeleton organization,
ion transport,
details
CFinderM0018723,4-dihydroxy-2-butanone-4-phosphate synthase activity,
GTP cyclohydrolase II activity,
Riboflavin_metabolism
riboflavin biosynthetic process,
isoprenoid biosynthetic process,
nucleic acid binding,
Terpenoid_backbone_biosynthesis
details
CFinderM001895phenylalanyl-tRNA aminoacylation,
mitochondrial outer membrane,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
details

4.Expression profilings