CFinderM001897's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
phosphatase activity,0.000947613GO:0016791
mRNA_surveillance_pathway0.021928485KEGG
dephosphorylation,0.025738575GO:0016311
protein dephosphorylation,0.030729844GO:0006470
protein ubiquitination,0.030729844GO:0016567
protein tyrosine phosphatase activity,0.041301948GO:0004725
protein tyrosine/serine/threonine phosphatase activity,0.041301948GO:0008138
ubiquitin ligase complex,0.044732883GO:0000151

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000253G0680plant U-box 17AT1G29340 (1.00E-143)
PH01000312G0990protein phosphatase 2A-4AT3G58500 (2.00E-172)
PH01000352G1050SPFH/Band 7/PHB domain-containing membrane-associated protein familyAT5G51570 (1.00E-127)
PH01000750G0220Haloacid dehalogenase-like hydrolase (HAD) superfamily proteinAT2G14110 (3.50E-68)
PH01000790G0590dual specificity protein phosphatase family proteinAT5G23720 (1.00E-180)
PH01001082G0140-AT5G19300 (1.80E-94)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000906HSF Transcription_Regulator(from PlantTFDB)
protein ADP-ribosylation,
dephosphorylation,
protein methylation,
Base_excision_repair
details
CFinderM000918GT48 GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
TKL-Pl-4 (from iTAK)
microtubule cytoskeleton organization,
(1->3)-beta-D-glucan biosynthetic process,
cytokinesis
1,3-beta-D-glucan synthase complex,
mRNA_surveillance_pathway
details
CFinderM000959RLK-Pelle_PERK-1 (from iTAK)
details
CFinderM001198RLK-Pelle_RLCK-VI (from iTAK)
Oxidative_phosphorylation
details
CFinderM001329Endocytosis
selenium binding,
dephosphorylation,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
details
CFinderM001330selenium binding,
dephosphorylation,
protein tyrosine/serine/threonine phosphatase activity,
protein tyrosine phosphatase activity,
Endocytosis
mRNA_surveillance_pathway
phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
details
CFinderM001331protein dephosphorylation,
microtubule organizing center,
spindle pole,
dephosphorylation,
microtubule cytoskeleton organization,
C2H2 Transcription_Regulator(from PlantTFDB)
isoprenoid biosynthetic process,
selenium binding,
details
CFinderM001399RNA_transport
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
Base_excision_repair
details
CFinderM001400Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
ribonuclease H activity,
DNA photolyase activity,
cytokinesis
aromatic amino acid family biosynthetic process,
microtubule cytoskeleton organization,
RNA metabolic process,
DNA_replication
microtubule binding,
ubiquitin ligase complex,
Ubiquitin_mediated_proteolysis
protein ubiquitination,
DNA repair,
details
CFinderM001480Steroid_biosynthesis
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor,
membrane,
details
CFinderM001698Steroid_biosynthesis
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
single-stranded DNA binding,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
WRKY Transcription_Regulator(from PlantTFDB)
dephosphorylation,
steroid biosynthetic process,
details
CFinderM001845protein complex,
microtubule,
PLATZ Transcription_Regulator(from iTAK)
Phagosome
mRNA_surveillance_pathway
CAMK_CAMKL-CHK1 (from iTAK)
protein polymerization,
microtubule-based process,
dephosphorylation,
details
CFinderM001878isoprenoid biosynthetic process,
mRNA_surveillance_pathway
C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
details
CFinderM001884single-stranded DNA binding,
DNA_replication
RNA processing,
details
CFinderM001885Base_excision_repair
NAD+ ADP-ribosyltransferase activity,
GT29 GlycosylTransferases
protein ADP-ribosylation,
sialyltransferase activity,
protein ubiquitination,
protein glycosylation,
details
CFinderM001886Steroid_biosynthesis
ubiquitin ligase complex,
sterol_24-C-methyltransferase_activity
dephosphorylation,
steroid biosynthetic process,
mRNA_surveillance_pathway
protein ubiquitination,
protein dephosphorylation,
details

4.Expression profilings