Detail information of GWHGAAZE005482


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007026871.12.13443E-85Proteasome inhibitor-related [Theobroma cacao]
Swissprottr|Q9M330|PSMF1_ARATH1E-63Probable proteasome inhibitor
trEMBLtr|A0A061ERS7|A0A061ERS7_THECC8E-86Proteasome inhibitor-related {ECO:0000313|EMBL:EOY07373.1}
TAIR10AT3G53970.29E-35proteasome inhibitor-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene86843518687046-
GWHAAZE00000002mRNA86843518687046-
GWHAAZE00000002exon86843518684408-
GWHAAZE00000002exon86845638684640-
GWHAAZE00000002exon86847208684783-
GWHAAZE00000002exon86848808684914-
GWHAAZE00000002exon86850308685110-
GWHAAZE00000002exon86861728686249-
GWHAAZE00000002exon86866118686782-
GWHAAZE00000002exon86868668687046-
GWHAAZE00000002CDS86868668687046-
GWHAAZE00000002CDS86866118686782-
GWHAAZE00000002CDS86861728686249-
GWHAAZE00000002CDS86850308685110-
GWHAAZE00000002CDS86848808684914-
GWHAAZE00000002CDS86847208684783-
GWHAAZE00000002CDS86845638684640-
GWHAAZE00000002CDS86843518684408-
Transcript Sequence

Network for GWHGAAZE005482

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11566.9PI31_Prot_N161201.20E-14
PF08577.12PI31_Prot_C1542173.50E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06700PSMF1 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf32.359
SRR3591706second leaf17.289
SRR3591707mature leaf14.908
SRR3591708Shoot apex28.230
SRR3591709Stem27.446
SRR3591710White floral bud26.929
SRR3591711White flower29.265
SRR3591712Green floral bud29.062
SRR3591713Yellow flower26.458
SRP173429 SRR8316895Juvenile bud stage 20.561
SRR8316896Juvenile bud stage 30.958
SRR8316897Juvenile bud stage 12.828
SRR8316894Third green stage 11.927
SRR8316900Third green stage 32.468
SRR8316901Third green stage 28.725
SRR8316898Complete white stage 12.236
SRR8316899Complete white stage 42.032
SRR8316903Complete white stage 15.808
SRR8316902Silver flowering stage17.648
SRR8316904Silver flowering stage19.251
SRR8316905Silver flowering stage10.129
SRR8316906Gold flowering stage 38.842
SRR8316907Gold flowering stage 41.594
SRR8316908Gold flowering stage 38.321
SRP132670SRR6706286Control34.045
SRR6706287Light intensity 50%35.657
SRR6706288Light intensity 20%34.749
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.413
CNS0095593Slightly white alabastrum(diploid) 221.794
CNS0095594Slightly white alabastrum(diploid) 321.119
CNS0095595Whole white alabastrum(diploid) 224.048
CNS0095596Whole white alabastrum(diploid) 320.528
CNS0095597Whole white alabastrum(diploid) 416.500
CNS0095598Silvery flower (diploied) 128.698
CNS0095599Silvery flower (diploied) 225.951
CNS0095600Silvery flower (diploied) 328.652
CNS0095601Golden flower (diploid) 126.521
CNS0095602Golden flower (diploid) 227.768
CNS0095603Golden flower (diploid) 325.920
CNS0095604Slightly white alabastrum(tetraploid) 121.202
CNS0095605Slightly white alabastrum(tetraploid) 216.751
CNS0095606Slightly white alabastrum(tetraploid) 337.848
CNS0095607Whole white alabastrum(tetraploid) 113.898
CNS0095608Whole white alabastrum(tetraploid) 212.084
CNS0095609Whole white alabastrum(tetraploid) 322.743
CNS0095610Silvery flower (diploied) 126.353
CNS0095611Silvery flower (diploied) 224.917
CNS0095612Silvery flower (diploied) 319.356
CNS0095613Golden flower (tetraploid) 117.580
CNS0095614Golden flower (tetraploid) 224.363
CNS0095615Golden flower (tetraploid) 317.158
CRA001975CRR073297Stem 120.531
CRR073298Stem 220.223
CRR073299Stem 321.245
CRR073300Leaf 121.248
CRR073301Leaf 219.604
CRR073302Leaf 321.482
CRR073303Juvenile bud 120.401
CRR073304Juvenile bud 217.721
CRR073305Juvenile bud 322.613
CRR073306Third green 113.164
CRR073307Third green 214.045
CRR073308Third green 310.163
CRR073309Second white 115.835
CRR073310Second white 213.393
CRR073311Second white 39.277
CRR073312Silver flowering 19.332
CRR073313Silver flowering 210.171
CRR073314Silver flowering 39.134
CRR073315Gold flowering 114.483
CRR073316Gold flowering 220.956
CRR073317Gold flowering 314.663
CRR073318Tawny withering 125.319
CRR073319Tawny withering 234.975
CRR073320Tawny withering 333.738