Home
Network
Network Search
Module Search
Search
Tools
Blast
Motif
GSEA
Heatmap Analysis
Jbrowse
Gene family
Cytochrome p450
TF Family
Protein Kinases
Ubiquitin
EAR family
Pathway
Download
Detail information of GWHGAAZE005482
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_007026871.1
2.13443E-85
Proteasome inhibitor-related [Theobroma cacao]
Swissprot
tr|Q9M330|PSMF1_ARATH
1E-63
Probable proteasome inhibitor
trEMBL
tr|A0A061ERS7|A0A061ERS7_THECC
8E-86
Proteasome inhibitor-related {ECO:0000313|EMBL:EOY07373.1}
TAIR10
AT3G53970.2
9E-35
proteasome inhibitor-related
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000002
gene
8684351
8687046
-
GWHAAZE00000002
mRNA
8684351
8687046
-
GWHAAZE00000002
exon
8684351
8684408
-
GWHAAZE00000002
exon
8684563
8684640
-
GWHAAZE00000002
exon
8684720
8684783
-
GWHAAZE00000002
exon
8684880
8684914
-
GWHAAZE00000002
exon
8685030
8685110
-
GWHAAZE00000002
exon
8686172
8686249
-
GWHAAZE00000002
exon
8686611
8686782
-
GWHAAZE00000002
exon
8686866
8687046
-
GWHAAZE00000002
CDS
8686866
8687046
-
GWHAAZE00000002
CDS
8686611
8686782
-
GWHAAZE00000002
CDS
8686172
8686249
-
GWHAAZE00000002
CDS
8685030
8685110
-
GWHAAZE00000002
CDS
8684880
8684914
-
GWHAAZE00000002
CDS
8684720
8684783
-
GWHAAZE00000002
CDS
8684563
8684640
-
GWHAAZE00000002
CDS
8684351
8684408
-
Transcript Sequence
>GWHTAAZE005490 ATGGCGACGGAGCAATCGGTGATGGCTCTAATTAGGGCATCGAGGCCCACTTTCCGAAACTGTCAAGACAAGGTCGCTTTCGCTCTCCACGCCACTTTCCTCGCCTCCGGTTATCTTCTCATTTCCACCGGTCCCCCGCTTTCACTGATGACGCTCTATCCTTCTTCTTCTTCTTCTTCAGATGAGGCGAGTATCGATCAATGGAATTCATTTGAAGACAATTATGCTTTCGTATACTCTAACCCCGAAAAGGACTCCAAGAAAGTGCTAGTCAAGTGTCTAGTAATGAACAGTAAGTTGCTGGTTGATGCTTTGACGGACGGAAGTTCCACACCTGTCCATCACGAAATCAATACTCAAGGATTGAGAGATGATATAAACAGGCCTCATTCTGGACCTCGATTCCATCAACCTCCTTATGATCCTTCAGGACTAGTTGTACCTCCAATTTATCCTGGTGTTGGTGGTGATGATCTCTTTCCTGGGCCTGGCGCTGGAATGTACCCTTCTAGGGGTGGGTTTGGCGGTGGAGGGGGCATGCTCATAGGACCAAACCATCCTGGTTTTGGTGGCATAGGTGGAGAGCCTGGTTTCCCAGGAGGACAACCTTCGAATGTTCCACCAGGTGCTCGTTTTGATCCATATGGCCCACCTGGTGTTCCTGGTTTTGAGCCAAACAGATTTGTCAGTTTACCATTCTTTAAACTGTATCGGGAGCCTTATCTAATCTTAACTGGATCTGATTAA
Network for GWHGAAZE005482
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF11566.9
PI31_Prot_N
16
120
1.20E-14
PF08577.12
PI31_Prot_C
154
217
3.50E-08
Protein Sequence
>GWHPAAZE005486 MATEQSVMALIRASRPTFRNCQDKVAFALHATFLASGYLLISTGPPLSLMTLYPSSSSSSDEASIDQWNSFEDNYAFVYSNPEKDSKKVLVKCLVMNSKLLVDALTDGSSTPVHHEINTQGLRDDINRPHSGPRFHQPPYDPSGLVVPPIYPGVGGDDLFPGPGAGMYPSRGGFGGGGGMLIGPNHPGFGGIGGEPGFPGGQPSNVPPGARFDPYGPPGVPGFEPNRFVSLPFFKLYREPYLILTGSD
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K06700
PSMF1
Proteasome
map03050
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
32.359
SRR3591706
second leaf
17.289
SRR3591707
mature leaf
14.908
SRR3591708
Shoot apex
28.230
SRR3591709
Stem
27.446
SRR3591710
White floral bud
26.929
SRR3591711
White flower
29.265
SRR3591712
Green floral bud
29.062
SRR3591713
Yellow flower
26.458
SRP173429
SRR8316895
Juvenile bud stage
20.561
SRR8316896
Juvenile bud stage
30.958
SRR8316897
Juvenile bud stage
12.828
SRR8316894
Third green stage
11.927
SRR8316900
Third green stage
32.468
SRR8316901
Third green stage
28.725
SRR8316898
Complete white stage
12.236
SRR8316899
Complete white stage
42.032
SRR8316903
Complete white stage
15.808
SRR8316902
Silver flowering stage
17.648
SRR8316904
Silver flowering stage
19.251
SRR8316905
Silver flowering stage
10.129
SRR8316906
Gold flowering stage
38.842
SRR8316907
Gold flowering stage
41.594
SRR8316908
Gold flowering stage
38.321
SRP132670
SRR6706286
Control
34.045
SRR6706287
Light intensity 50%
35.657
SRR6706288
Light intensity 20%
34.749
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
23.413
CNS0095593
Slightly white alabastrum(diploid) 2
21.794
CNS0095594
Slightly white alabastrum(diploid) 3
21.119
CNS0095595
Whole white alabastrum(diploid) 2
24.048
CNS0095596
Whole white alabastrum(diploid) 3
20.528
CNS0095597
Whole white alabastrum(diploid) 4
16.500
CNS0095598
Silvery flower (diploied) 1
28.698
CNS0095599
Silvery flower (diploied) 2
25.951
CNS0095600
Silvery flower (diploied) 3
28.652
CNS0095601
Golden flower (diploid) 1
26.521
CNS0095602
Golden flower (diploid) 2
27.768
CNS0095603
Golden flower (diploid) 3
25.920
CNS0095604
Slightly white alabastrum(tetraploid) 1
21.202
CNS0095605
Slightly white alabastrum(tetraploid) 2
16.751
CNS0095606
Slightly white alabastrum(tetraploid) 3
37.848
CNS0095607
Whole white alabastrum(tetraploid) 1
13.898
CNS0095608
Whole white alabastrum(tetraploid) 2
12.084
CNS0095609
Whole white alabastrum(tetraploid) 3
22.743
CNS0095610
Silvery flower (diploied) 1
26.353
CNS0095611
Silvery flower (diploied) 2
24.917
CNS0095612
Silvery flower (diploied) 3
19.356
CNS0095613
Golden flower (tetraploid) 1
17.580
CNS0095614
Golden flower (tetraploid) 2
24.363
CNS0095615
Golden flower (tetraploid) 3
17.158
CRA001975
CRR073297
Stem 1
20.531
CRR073298
Stem 2
20.223
CRR073299
Stem 3
21.245
CRR073300
Leaf 1
21.248
CRR073301
Leaf 2
19.604
CRR073302
Leaf 3
21.482
CRR073303
Juvenile bud 1
20.401
CRR073304
Juvenile bud 2
17.721
CRR073305
Juvenile bud 3
22.613
CRR073306
Third green 1
13.164
CRR073307
Third green 2
14.045
CRR073308
Third green 3
10.163
CRR073309
Second white 1
15.835
CRR073310
Second white 2
13.393
CRR073311
Second white 3
9.277
CRR073312
Silver flowering 1
9.332
CRR073313
Silver flowering 2
10.171
CRR073314
Silver flowering 3
9.134
CRR073315
Gold flowering 1
14.483
CRR073316
Gold flowering 2
20.956
CRR073317
Gold flowering 3
14.663
CRR073318
Tawny withering 1
25.319
CRR073319
Tawny withering 2
34.975
CRR073320
Tawny withering 3
33.738