LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE002217

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE002217

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE002217AT4G28140.1Integrase-type DNA-binding superfamily protein1positive
GWHGAAZE002206AT2G20880.1Integrase-type DNA-binding superfamily protein0.96positive
GWHGAAZE009195AT2G39380.1exocyst subunit exo70 family protein H20.95positive
GWHGAAZE009196AT2G39380.1exocyst subunit exo70 family protein H20.9positive
GWHGAAZE015092AT1G65690.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.9positive
GWHGAAZE019408----0.9positive
GWHGAAZE029336AT1G09155.1phloem protein 2-B150.9positive
GWHGAAZE017776----0.9positive
GWHGAAZE000261AT3G51895.1sulfate transporter 3;10.9positive
GWHGAAZE019392----0.9positive
GWHGAAZE029343AT1G09155.1phloem protein 2-B150.9positive
GWHGAAZE019403AT2G45220.1Plant invertase/pectin methylesterase inhibitor superfamily0.9positive
GWHGAAZE017102AT5G21960.1Integrase-type DNA-binding superfamily protein0.9positive
GWHGAAZE006603AT1G59725.1DNAJ heat shock family protein0.89positive
GWHGAAZE032134AT4G19810.1Glycosyl hydrolase family protein with chitinase insertion domain0.89positive
GWHGAAZE006602AT1G01440.1Protein of unknown function (DUF3133)0.89positive
GWHGAAZE022100AT3G05030.1sodium hydrogen exchanger 20.89positive
GWHGAAZE020514AT1G11925.1Stigma-specific Stig1 family protein0.89positive
GWHGAAZE027171AT4G27470.1RING membrane-anchor 30.89positive
GWHGAAZE022534AT5G35525.1PLAC8 family protein0.88positive
GWHGAAZE011692AT1G03220.1Eukaryotic aspartyl protease family protein0.88positive
GWHGAAZE019394AT2G45220.1Plant invertase/pectin methylesterase inhibitor superfamily0.88positive
GWHGAAZE023255AT3G50440.1methyl esterase 100.88positive
GWHGAAZE016252AT1G35830.1VQ motif-containing protein0.88positive
GWHGAAZE011905AT1G03220.1Eukaryotic aspartyl protease family protein0.87positive
GWHGAAZE010437AT5G44440.1FAD-binding Berberine family protein0.87positive
GWHGAAZE019407AT3G06830.1Plant invertase/pectin methylesterase inhibitor superfamily0.87positive
GWHGAAZE023917AT1G30730.1FAD-binding Berberine family protein0.87positive
GWHGAAZE009023AT5G22850.1Eukaryotic aspartyl protease family protein0.86positive
GWHGAAZE009744AT3G63380.1ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein0.86positive
GWHGAAZE021588AT3G06080.2Plant protein of unknown function (DUF828)0.86positive
GWHGAAZE021513AT2G32800.1protein kinase family protein0.86positive
GWHGAAZE006645AT5G46080.1Protein kinase superfamily protein0.86positive
GWHGAAZE021718AT5G60900.1receptor-like protein kinase 10.86positive


Expression profiling, GSEA and motif analysis