LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE006567

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE006567

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE006567AT1G61610.1S-locus lectin protein kinase family protein1positive
GWHGAAZE004281AT4G19880.1Glutathione S-transferase family protein0.9positive
GWHGAAZE009832AT2G48020.2Major facilitator superfamily protein0.89positive
GWHGAAZE024239AT1G71696.2carboxypeptidase D, putative0.88positive
GWHGAAZE016117AT1G21200.1sequence-specific DNA binding transcription factors0.88positive
GWHGAAZE025831AT5G35560.1DENN (AEX-3) domain-containing protein0.88positive
GWHGAAZE030991AT1G52080.1actin binding protein family0.87positive
GWHGAAZE009653AT4G28600.1no pollen germination related 20.87positive
GWHGAAZE023884AT1G75280.1NmrA-like negative transcriptional regulator family protein0.87positive
GWHGAAZE016382AT1G10150.1Carbohydrate-binding protein0.87positive
GWHGAAZE018267AT4G38350.1Patched family protein0.87positive
GWHGAAZE026261AT1G60710.1NAD(P)-linked oxidoreductase superfamily protein0.86positive
GWHGAAZE029645AT1G71190.1senescence associated gene 180.86positive
GWHGAAZE008166AT4G34890.1xanthine dehydrogenase 10.86positive
GWHGAAZE010012AT2G48020.2Major facilitator superfamily protein0.86positive
GWHGAAZE017850AT5G62680.1Major facilitator superfamily protein0.86positive
GWHGAAZE000763AT3G46540.1ENTH/VHS family protein0.86positive
GWHGAAZE000762AT1G07630.1pol-like 50.86positive
GWHGAAZE025802AT1G72770.3homology to ABI10.86positive
GWHGAAZE022828AT1G69830.1alpha-amylase-like 30.86positive


Expression profiling, GSEA and motif analysis