LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE012998

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE012998

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE012998AT3G51840.1acyl-CoA oxidase 41positive
GWHGAAZE013001AT3G51840.1acyl-CoA oxidase 40.93positive
GWHGAAZE006078AT4G11600.1glutathione peroxidase 60.9positive
GWHGAAZE033819AT1G09310.1Protein of unknown function, DUF5380.9positive
GWHGAAZE007088AT1G51340.2MATE efflux family protein0.89positive
GWHGAAZE009601AT4G13200.1Plastoglobular protein which is involved in chloroplast function and thylakoid formation.0.89positive
GWHGAAZE005521AT5G02230.2Haloacid dehalogenase-like hydrolase (HAD) superfamily protein0.89positive
GWHGAAZE027074AT1G53580.1glyoxalase II 30.88positive
GWHGAAZE009116AT5G60600.14-hydroxy-3-methylbut-2-enyl diphosphate synthase0.88positive
GWHGAAZE016202AT1G22170.1Phosphoglycerate mutase family protein0.87positive
GWHGAAZE007881AT5G65140.1Haloacid dehalogenase-like hydrolase (HAD) superfamily protein0.87positive
GWHGAAZE018882AT5G49950.1alpha/beta-Hydrolases superfamily protein0.87positive
GWHGAAZE016177AT5G09360.1laccase 140.87positive
GWHGAAZE007197AT3G55290.2NAD(P)-binding Rossmann-fold superfamily protein0.87positive
GWHGAAZE015203AT5G65380.1MATE efflux family protein0.87positive
GWHGAAZE031104AT5G07990.1Cytochrome P450 superfamily protein0.86positive
GWHGAAZE008929AT2G36090.1F-box family protein0.86positive
GWHGAAZE020582AT1G08760.1Plant protein of unknown function (DUF936)0.86positive
GWHGAAZE030286AT1G17840.1white-brown complex homolog protein 110.86positive
GWHGAAZE008201AT4G12070.1hypothetical protein;(source:Araport11)0.86positive
GWHGAAZE026760AT2G30860.1glutathione S-transferase PHI 90.86positive
GWHGAAZE025283AT5G14860.1UDP-Glycosyltransferase superfamily protein0.86positive
GWHGAAZE014839AT5G66760.1succinate dehydrogenase 1-10.86positive
GWHGAAZE010941AT1G10830.115-cis-zeta-carotene isomerase0.86positive
GWHGAAZE024838AT2G46320.1Mitochondrial substrate carrier family protein0.86positive


Expression profiling, GSEA and motif analysis