LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE024156

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE024156

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE024156AT4G25980.1Peroxidase superfamily protein1positive
GWHGAAZE030410AT3G18570.1Oleosin family protein0.88positive
GWHGAAZE016924AT4G09810.1Nucleotide-sugar transporter family protein0.88positive
GWHGAAZE025691AT1G77210.2sugar transporter 140.87positive
GWHGAAZE026927AT3G21880.1B-box type zinc finger protein with CCT domain0.87positive
GWHGAAZE011637AT4G14368.1Regulator of chromosome condensation (RCC1) family protein0.86positive
GWHGAAZE024369----0.86positive
GWHGAAZE003241AT1G07410.1RAB GTPase homolog A2B0.86positive
GWHGAAZE029708AT1G25270.1nodulin MtN21 /EamA-like transporter family protein0.86positive
GWHGAAZE027162AT4G27480.2Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein0.86positive
GWHGAAZE003191AT5G02500.1heat shock cognate protein 70-10.86positive
GWHGAAZE012753AT5G24130.1polypyrimidine tract-binding-like protein;(source:Araport11)0.86positive
GWHGAAZE000451AT3G25030.2RING/U-box superfamily protein0.86positive
GWHGAAZE011443AT1G07510.1FTSH protease 100.86positive
GWHGAAZE021790AT1G04780.1Ankyrin repeat family protein0.86positive
GWHGAAZE006804AT4G21060.2Galactosyltransferase family protein0.86positive
GWHGAAZE027451AT5G41940.1Ypt/Rab-GAP domain of gyp1p superfamily protein0.86positive


Expression profiling, GSEA and motif analysis