LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE028446

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE028446

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE028446AT5G25880.1NADP-malic enzyme 31positive
GWHGAAZE004245AT1G08570.1atypical CYS HIS rich thioredoxin 4-0.58negative
GWHGAAZE005078AT3G10480.2NAC domain containing protein 50-0.58negative
GWHGAAZE011302AT1G04780.1Ankyrin repeat family protein-0.57negative
GWHGAAZE007090AT3G57550.2guanylate kinase-0.57negative
GWHGAAZE011810AT3G04910.1with no lysine (K) kinase 1-0.57negative
GWHGAAZE012144AT4G15560.1Deoxyxylulose-5-phosphate synthase-0.57negative
GWHGAAZE008201AT4G12070.1hypothetical protein;(source:Araport11)-0.57negative
GWHGAAZE014959AT1G20110.1RING/FYVE/PHD zinc finger superfamily protein-0.57negative
GWHGAAZE012141AT4G15560.1Deoxyxylulose-5-phosphate synthase-0.57negative
GWHGAAZE018844AT1G22930.1T-complex protein 11-0.57negative
GWHGAAZE005048AT3G54850.1plant U-box 14-0.57negative
GWHGAAZE002545AT1G78420.2RING/U-box superfamily protein-0.57negative
GWHGAAZE005950AT4G23895.2Pleckstrin homology (PH) domain-containing protein-0.57negative
GWHGAAZE027852AT4G17900.1PLATZ transcription factor family protein-0.56negative
GWHGAAZE002186AT4G27470.1RING membrane-anchor 3-0.56negative
GWHGAAZE016486AT5G44250.1Protein of unknown function DUF829, transmembrane 53-0.56negative
GWHGAAZE027388AT5G45030.2Trypsin family protein-0.56negative


Expression profiling, GSEA and motif analysis