LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE033217

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE033217

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE033217AT5G40150.1Peroxidase superfamily protein1positive
GWHGAAZE014840AT5G66770.1GRAS family transcription factor0.91positive
GWHGAAZE005347AT3G10980.1PLAC8 family protein0.9positive
GWHGAAZE012703AT4G27720.1Major facilitator superfamily protein0.9positive
GWHGAAZE004329AT4G20170.1Domain of unknown function (DUF23)0.9positive
GWHGAAZE017669AT3G02230.1reversibly glycosylated polypeptide 10.9positive
GWHGAAZE003851AT3G44150.1Expp1 protein;(source:Araport11)0.89positive
GWHGAAZE023733AT5G45160.1Root hair defective 3 GTP-binding protein (RHD3)0.89positive
GWHGAAZE030196AT4G38580.1farnesylated protein 60.88positive
GWHGAAZE017386AT4G32890.1GATA transcription factor 90.88positive
GWHGAAZE016464AT1G45688.1CC1 is a plant specific gene that interacts with with the cellulose synthase complex and microtubules. It appears to play a role in localizing CESA to the membrane, microtuble dynamics , particularly during salt stress.0.88positive
GWHGAAZE005348AT5G05350.1PLAC8 family protein0.88positive
GWHGAAZE029602AT1G57720.2Translation elongation factor EF1B, gamma chain0.88positive
GWHGAAZE026952AT1G05070.1Protein of unknown function (DUF1068)0.87positive
GWHGAAZE016267AT4G08980.5F-BOX WITH WD-40 20.87positive
GWHGAAZE018773AT5G64090.1hyccin;(source:Araport11)0.87positive
GWHGAAZE025199AT5G05170.1Cellulose synthase family protein0.86positive
GWHGAAZE011289AT2G02360.1phloem protein 2-B100.86positive


Expression profiling, GSEA and motif analysis