Annotation: Uncharacterized protein |
Chromosome | Strand | Region | Start | End | UCSC |
---|---|---|---|---|---|
8 | - | gene | 152253211 | 152257798 | LINK |
Gene: |
>GRMZM2G014089 |
Promoter(up TSS 3kb): |
>GRMZM2G014089_promoter |
Transcript: |
>GRMZM2G014089_T01 |
>GRMZM2G014089_T02 |
CDS: |
>GRMZM2G014089_T02 |
>GRMZM2G014089_T01 |
Protein: |
>GRMZM2G014089_P01 |
>GRMZM2G014089_P02 |
States in Promoter (2kb) | States in Genebody | States in Downstream (2kb) | |||
---|---|---|---|---|---|
E38,E26,E23,E11,E3,E4 | E11,E4,E2,E2,E6,E4,E6,E4,E6,E3,E6,E13,E6 | E6,E4,E13,E11,E12,E25 | |||
Protein ID | Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | E-value |
---|---|---|---|---|---|
GRMZM2G014089_P01 | PF00005.24 | ABC_tran | 388 | 537 | 1.00E-32 |
GRMZM2G014089_P01 | PF00664.20 | ABC_membrane | 50 | 321 | 1.10E-58 |
GRMZM2G014089_P01 | PF00664.20 | ABC_membrane | 713 | 984 | 6.30E-56 |
Species | Gene ID | Blast Evalue |
---|---|---|
Arabidopsis thaliana | AT1G02520 | 0 |
Arabidopsis thaliana | AT2G47000 | 0 |
Arabidopsis thaliana | AT3G62150 | 0 |
Oryza sative | LOC_Os01g50160 | 0 |
Oryza sative | LOC_Os01g50080 | 0 |
Oryza sative | LOC_Os05g47500 | 0 |
Category | Family |
---|---|
B73 Global RNA-seq network | B73RALLCFM32 |
B73 Global Microarray network | B73MGSE27004CFM516 |
B73 Global Microarray network | B73MGSE27004CFM574 |
B73 Global Microarray network | B73MGSE27004CFM575 |
B73 abiotic stress conditional network | ABIOTICCFM11 |
B73 maize kernal conditional network | GSE62778CFM699 |
B73 maize kernal conditional network | GSE62778CFM700 |
B73 maize embryo and endosperm conditional network | SRP037559CFM44 |