| Annotation: Serinc-domain containing serine and sphingolipid biosynthesis protein |
| Chromosome | Strand | Region | Start | End | UCSC |
|---|---|---|---|---|---|
| 5 | - | gene | 213330139 | 213332966 | LINK |
| Gene: |
| >GRMZM2G018103 |
| Promoter(up TSS 3kb): |
| >GRMZM2G018103_promoter |
| Transcript: |
| >GRMZM2G018103_T01 |
| CDS: |
| >GRMZM2G018103_T01 |
| Protein: |
| >GRMZM2G018103_P01 |
| States in Promoter (2kb) | States in Genebody | States in Downstream (2kb) | |||
|---|---|---|---|---|---|
| E22,E6,E13,E3,E4 | E4,E5,E7,E6,E4,E3,E6 | E6,E4,E5,E4,E5,E4 | |||
| Protein ID | Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | E-value |
|---|---|---|---|---|---|
| GRMZM2G018103_P01 | PF03348.12 | Serinc | 9 | 412 | 7.60E-116 |
| Species | Gene ID | Blast Evalue |
|---|---|---|
| Arabidopsis thaliana | AT1G16180 | 0 |
| Arabidopsis thaliana | AT3G06170 | 2.00E-148 |
| Arabidopsis thaliana | AT3G24460 | 1.00E-43 |
| Oryza sative | LOC_Os02g54990 | 0 |
| Oryza sative | LOC_Os03g34300 | 1.00E-155 |
| Oryza sative | LOC_Os04g42720 | 1.00E-39 |
| Category | Family |
|---|---|
| GO | GO:0016020 |
| Subcellular location | endoplasmic reticulum |
| Subcellular location | golgi |
| Subcellular location | plasma membrane |
| Subcellular location | vacuole |
| Category | Family |
|---|---|
| B73 abiotic stress conditional network | ABIOTICCFM385 |
| B73 abiotic stress conditional network | ABIOTICCFM936 |
| B73 abiotic stress conditional network | ABIOTICCFM1008 |
| B73 abiotic stress conditional network | ABIOTICCFM1041 |
| B73 abiotic stress conditional network | ABIOTICCFM1166 |
| B73 abiotic stress conditional network | ABIOTICCFM1197 |
| B73 abiotic stress conditional network | ABIOTICCFM1247 |
| B73 maize kernal conditional network | GSE62778CFM29 |
| B73 maize kernal conditional network | GSE62778CFM85 |
| B73 maize kernal conditional network | GSE62778CFM269 |
| B73 maize kernal conditional network | GSE62778CFM321 |
| B73 maize kernal conditional network | GSE62778CFM429 |
| B73 maize kernal conditional network | GSE62778CFM460 |
| B73 maize kernal conditional network | GSE62778CFM479 |
| B73 maize kernal conditional network | GSE62778CFM503 |
| B73 maize kernal conditional network | GSE62778CFM554 |
| B73 maize kernal conditional network | GSE62778CFM558 |
| B73 maize kernal conditional network | GSE62778CFM559 |
| B73 maize kernal conditional network | GSE62778CFM565 |
| B73 maize kernal conditional network | GSE62778CFM569 |
| B73 maize kernal conditional network | GSE62778CFM658 |
| B73 maize kernal conditional network | GSE62778CFM677 |
| B73 maize kernal conditional network | GSE62778CFM681 |
| B73 maize kernal conditional network | GSE62778CFM684 |
| B73 maize kernal conditional network | GSE62778CFM685 |
| B73 maize kernal conditional network | GSE62778CFM692 |
| B73 maize kernal conditional network | GSE62778CFM707 |
| B73 maize kernal conditional network | GSE62778CFM711 |
| B73 maize kernal conditional network | GSE62778CFM717 |
| B73 maize kernal conditional network | GSE62778CFM722 |
| B73 maize kernal conditional network | GSE62778CFM741 |
| B73 maize kernal conditional network | GSE62778CFM745 |
| B73 maize kernal conditional network | GSE62778CFM747 |
| B73 maize development conditional network | SRP010680CFM1180 |
| B73 maize embryo and endosperm conditional network | SRP037559CFM221 |