| Annotation: Putative HLH DNA-binding domain superfamily protein |
| Chromosome | Strand | Region | Start | End | UCSC |
|---|---|---|---|---|---|
| 9 | - | gene | 68081459 | 68085268 | LINK |
| Gene: |
| >GRMZM2G045109 |
| Promoter(up TSS 3kb): |
| >GRMZM2G045109_promoter |
| Transcript: |
| >GRMZM2G045109_T01 |
| CDS: |
| >GRMZM2G045109_T01 |
| Protein: |
| >GRMZM2G045109_P01 |
| States in Promoter (2kb) | States in Genebody | States in Downstream (2kb) | |||
|---|---|---|---|---|---|
| E24,E1,E3 | E3,E2,E1,E11,E1,E24,E1,E11,E1 | E1,E24,E10,E24 | |||
| Protein ID | Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | E-value |
|---|---|---|---|---|---|
| GRMZM2G045109_P01 | PF00010.23 | HLH | 99 | 149 | 4.10E-11 |
| Species | Gene ID | Blast Evalue |
|---|---|---|
| Arabidopsis thaliana | AT5G53210 | 2.00E-74 |
| Arabidopsis thaliana | AT3G06120 | 1.00E-28 |
| Arabidopsis thaliana | AT3G24140 | 8.00E-25 |
| Oryza sative | LOC_Os06g33450 | 1.00E-107 |
| Oryza sative | LOC_Os02g15760 | 2.00E-84 |
| Oryza sative | LOC_Os05g51820 | 9.00E-27 |
| Category | Family |
|---|---|
| GO | GO:0046983 |
| GO | GO:0003677 |
| Subcellular location | nucleus |
| Category | Family |
|---|---|
| B73 Global RNA-seq network | B73RALLCFM142 |
| B73 Global RNA-seq network | B73RALLCFM146 |
| B73 abiotic stress conditional network | ABIOTICCFM24 |
| B73 abiotic stress conditional network | ABIOTICCFM504 |
| B73 tissue specific conditional network | TISSUECFM184 |
| B73 maize development conditional network | SRP010680CFM55 |
| B73 maize development conditional network | SRP010680CFM147 |
| B73 maize development conditional network | SRP010680CFM335 |
| B73 leaf section conditional network | SRP018823CFM1 |