GRMZM2G062084's detail annotation

1.Annotation (Gramene)

Annotation: Uncharacterized protein

2.Location

ChromosomeStrandRegionStartEndUCSC
4+gene172084974172089808LINK

3.Sequences

Gene:
Promoter(up TSS 3kb):
Transcript:
CDS:
Protein:

4.Chromatin states

States in Promoter (2kb)States in GenebodyStates in Downstream (2kb)
E4,E3,E11,E6,E4,E4,E5,E7,E12,E14,E22,E21,E14,E12,E7,E12,E14,E6,E4,E6,E13,E13,E11,E23,E26,E38,E35,

5.Protein domain

Protein IDPfam AccessionPfam AnnotationAlignment StartAlignment StartE-value
GRMZM2G062084_P01PF00225.20Kinesin903725.70E-59
GRMZM2G062084_P02PF00225.20Kinesin902281.00E-20
GRMZM2G062084_P02PF00225.20Kinesin2473503.80E-26

6.Blast top3 hits

SpeciesGene IDBlast Evalue
Arabidopsis thalianaAT4G143300
Arabidopsis thalianaAT4G051902.00E-32
Arabidopsis thalianaAT4G212702.00E-32
Oryza sativeLOC_Os02g565400
Oryza sativeLOC_Os12g421601.00E-31
Oryza sativeLOC_Os03g022903.00E-30

7.Heuristic function module

CategoryFamily
GOGO:0000166
GOGO:0003777
GOGO:0005524
GOGO:0009524
GOGO:0005874
GOGO:0005875
GOGO:0007018
Subcellular locationplastid

8.Predicted function module

CategoryFamily
B73 Global RNA-seq networkB73RALLCFM147
B73 Global Microarray networkB73MGSE27004CFM17
B73 biotic stress conditional networkBIOTICCFM40
B73 abiotic stress conditional networkABIOTICCFM13
B73 tissue specific conditional networkTISSUECFM135
B73 maize kernal conditional networkGSE62778CFM29
B73 maize development conditional networkSRP010680CFM12
B73 maize development conditional networkSRP010680CFM128
B73 leaf section conditional networkSRP018823CFM23
Mo17 tissue specific networkMO17RALLCFM66
Mo17 tissue specific networkMO17RALLCFM94
Mo17 tissue specific networkMO17RALLCFM562

9.Expression pattern