Annotation: Uncharacterized protein |
Chromosome | Strand | Region | Start | End | UCSC |
---|---|---|---|---|---|
4 | + | gene | 172084974 | 172089808 | LINK |
Gene: |
>GRMZM2G062084 |
Promoter(up TSS 3kb): |
>GRMZM2G062084_promoter |
Transcript: |
>GRMZM2G062084_T01 |
>GRMZM2G062084_T02 |
CDS: |
>GRMZM2G062084_T02 |
>GRMZM2G062084_T01 |
Protein: |
>GRMZM2G062084_P01 |
>GRMZM2G062084_P02 |
States in Promoter (2kb) | States in Genebody | States in Downstream (2kb) | |||
---|---|---|---|---|---|
E4,E3,E11,E6,E4, | E4,E5,E7,E12,E14,E22,E21,E14,E12,E7,E12,E14,E6,E4,E6,E13, | E13,E11,E23,E26,E38,E35, | |||
Protein ID | Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | E-value |
---|---|---|---|---|---|
GRMZM2G062084_P01 | PF00225.20 | Kinesin | 90 | 372 | 5.70E-59 |
GRMZM2G062084_P02 | PF00225.20 | Kinesin | 90 | 228 | 1.00E-20 |
GRMZM2G062084_P02 | PF00225.20 | Kinesin | 247 | 350 | 3.80E-26 |
Species | Gene ID | Blast Evalue |
---|---|---|
Arabidopsis thaliana | AT4G14330 | 0 |
Arabidopsis thaliana | AT4G05190 | 2.00E-32 |
Arabidopsis thaliana | AT4G21270 | 2.00E-32 |
Oryza sative | LOC_Os02g56540 | 0 |
Oryza sative | LOC_Os12g42160 | 1.00E-31 |
Oryza sative | LOC_Os03g02290 | 3.00E-30 |
Category | Family |
---|---|
GO | GO:0000166 |
GO | GO:0003777 |
GO | GO:0005524 |
GO | GO:0009524 |
GO | GO:0005874 |
GO | GO:0005875 |
GO | GO:0007018 |
Subcellular location | plastid |
Category | Family |
---|---|
B73 Global RNA-seq network | B73RALLCFM147 |
B73 Global Microarray network | B73MGSE27004CFM17 |
B73 biotic stress conditional network | BIOTICCFM40 |
B73 abiotic stress conditional network | ABIOTICCFM13 |
B73 tissue specific conditional network | TISSUECFM135 |
B73 maize kernal conditional network | GSE62778CFM29 |
B73 maize development conditional network | SRP010680CFM12 |
B73 maize development conditional network | SRP010680CFM128 |
B73 leaf section conditional network | SRP018823CFM23 |
Mo17 tissue specific network | MO17RALLCFM66 |
Mo17 tissue specific network | MO17RALLCFM94 |
Mo17 tissue specific network | MO17RALLCFM562 |