GRMZM2G091160's detail annotation

1.Annotation (Gramene)

not available!

2.Location

ChromosomeStrandRegionStartEndUCSC
5-gene179830403179832330LINK

3.Sequences

Gene:
Promoter(up TSS 3kb):
Transcript:
CDS:
Protein:

4.Chromatin states

States in Promoter (2kb)States in GenebodyStates in Downstream (2kb)
E29,E38,E25,E13E13,E13,E11,E13,E25E13,E23,E26,E23,E11,E23,E26

5.Protein domain

Protein IDPfam AccessionPfam AnnotationAlignment StartAlignment StartE-value

6.Blast top3 hits

SpeciesGene IDBlast Evalue
Arabidopsis thalianaAT5G278304.00E-05
Arabidopsis thalianaAT5G621902
Arabidopsis thalianaAT1G318003.3
Oryza sativeLOC_Os02g379403.00E-19
Oryza sativeLOC_Os02g572904.2

7.Heuristic function module

CategoryFamily
Subcellular locationendoplasmic reticulum
Subcellular locationextracellular
Subcellular locationgolgi
Subcellular locationplastid
Subcellular locationvacuole

8.Predicted function module

CategoryFamily
B73 maize kernal conditional networkGSE62778CFM64
B73 maize development conditional networkSRP010680CFM2

9.Expression pattern